Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01040 ATGACAATTCCAGATAAGAAACCCAACAAATTAGTGCCTTTCACGGAACAAGACGCTGCTAGAATCGCACAAAGGTACGATGCAACGACGGTGTTAACCTTACTTCAGGAGGTGGCTCATGCTCAGTGTCCGAACGCAAAAATTGATTGGAATGAATTGGTGAAGAGAACCTCAACTGGGATCTCTAATGCCAGGGAGTATCAGATGCTGTGGCGGCATTTAGCCTACGGTCATGCCCTTCTCGAAAATCTCGAAAATGGCGCGGAACCTCTGGATGATGATAGTGACCTAGAATATGAGGTTGAAGCATTACCCCCAATAAGTCCGGAAGTAGCATCAGAGACTGTGGCATGTGTGAAGGTAATGATTGCTTCACTAAGTGAATCAACACCTAGTAGTTCAACAATTGAGGCTCCACTGACTATACATGCTCCAGTTTGCAATTCATCTAAAACTTCTAACAAGGGATCACAATCCTCTAGTTTGATGCAAGGAACAGAGATTATTTTTCCGGTTACTATTAAGAGACAGACACTGCCAGCTGTATCATTGACAGATAATATTGAAAGCAAGGGATTAGATGGTAGCAACATGGCTTCCAAAAAGAGGAAAATAGCATGGTCAGAGGAAGAGGACAATCTGCTACGAGATGCTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAGGAGGCAACTTTCCTGTTAAGAGAACTGCTAAACAGATATATCAAAGGTGGAACTTTTTGCAAAAGAAAGATGACAGTACCAATTCAGGACCCATCTTGACCAGCACGCGTTATGATACTGCTGAGCAACAAGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAGTTAACTGCTCCCGGAATGACCAGTTACGGTAGGACAACCTTGAATATGTCAGGTAAAAATTTGTTGCAGCATGTTGCTACAGAGTCTTCACCGCTTCATGGTCATGTTGTACCACCTCAGCATCCTTCTCAAGGGTCTTTTGTGGGGTCTTGTAGTTCCTCACTGAAATCTACATTAGTTCCTGGAAAACCATTGCTGGAAGTTCATCCAACTCCTAACGGTACAGCAAAAGGTGCCACAATAGTTTCTGGTGCCCAAATAGTTTCAACGTCAGATTCTGGATCACAAGTAAAGGTTTCACATAGAAACGTGGTTGCTACAACAAGTAGTTGTTTGACAAAGTCATCAACTCCTGCGTCATTGCCTCCGGAATCAAAGGTACAATTTCAAACGGATCCGAGTTCAGCACCTGTTTGCACCCAATCAACTGTTGTAATTGCATGTCCTTGCTGCATCATGCATTAA 1341 0.4303 MTIPDKKPNKLVPFTEQDAARIAQRYDATTVLTLLQEVAHAQCPNAKIDWNELVKRTSTGISNAREYQMLWRHLAYGHALLENLENGAEPLDDDSDLEYEVEALPPISPEVASETVACVKVMIASLSESTPSSSTIEAPLTIHAPVCNSSKTSNKGSQSSSLMQGTEIIFPVTIKRQTLPAVSLTDNIESKGLDGSNMASKKRKIAWSEEEDNLLRDAVQRFGEGHWATIAKGGNFPVKRTAKQIYQRWNFLQKKDDSTNSGPILTSTRYDTAEQQATRHSLSLALDMPLKKLTAPGMTSYGRTTLNMSGKNLLQHVATESSPLHGHVVPPQHPSQGSFVGSCSSSLKSTLVPGKPLLEVHPTPNGTAKGATIVSGAQIVSTSDSGSQVKVSHRNVVATTSSCLTKSSTPASLPPESKVQFQTDPSSAPVCTQSTVVIACPCCIMH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01040 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 257 IPR017930 -
Arst8g01040 446 SMART sant 203 255 IPR001005 -
Arst8g01040 446 Gene3D - 196 260 - -
Arst8g01040 446 ProSiteProfiles Myb-like domain profile. 199 253 IPR001005 -
Arst8g01040 446 SUPERFAMILY Homeodomain-like 202 255 IPR009057 -
Arst8g01040 446 CDD SANT_TRF 207 249 - -
Arst8g01040 446 Pfam Myb-like DNA-binding domain 206 250 IPR001005 -
Arst8g01040 446 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01040 Arst-Chr8 14421593 14425196 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst8g01040 Myb_DNA-binding 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01040 - - adu:107461104 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01040 8 14421593 14425196 Arst8g01040 8 14421593 14425196 ECH
Arst8g01040 8 14421593 14425196 Arst8g01040 8 14421593 14425196 PCT