Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01032 ATGATGTTGTGCTCATTCCATCATCATCACCTTTGGCTTCAGTTCCATTCAACAATGGCCTATTCGGGTTCACATAGGCTACATAGCAATATCGAAAGCTGCGGTTTTTGTCATAAGCCCATGTGTGCAGATCGATTATGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTACCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGTGCCTGAGCAGGACTCTATTTCTGCAAAAGACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTAAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTGTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTCCGAAGAGTACCTTCGAGTTAAGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCTATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATAACAAGTTTGAGGAAACCTTGACATCTGACTTGAGAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGCGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCATGATAATTTGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAAGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGGACACTTGAAATAGACGACAAAGTTAGTCCACCTATCCCTGCAGAGCCTCCAGAATTCGCTATCCAGCAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2091 0.4175 MMLCSFHHHHLWLQFHSTMAYSGSHRLHSNIESCGFCHKPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLPRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLCLSRTLFLQKTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDNKFEETLTSDLRVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDHDNLVQKTSKSMQPKEKAGSAGNKTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKVSPPIPAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01032 696 MobiDBLite consensus disorder prediction 569 613 - -
Arst8g01032 696 Pfam Mechanosensitive ion channel 250 459 IPR006685 GO:0016020|GO:0055085
Arst8g01032 696 Gene3D - 202 307 - -
Arst8g01032 696 MobiDBLite consensus disorder prediction 492 513 - -
Arst8g01032 696 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 38 676 IPR045042 -
Arst8g01032 696 MobiDBLite consensus disorder prediction 656 696 - -
Arst8g01032 696 MobiDBLite consensus disorder prediction 676 690 - -
Arst8g01032 696 SUPERFAMILY Sm-like ribonucleoproteins 293 363 IPR010920 -
Arst8g01032 696 MobiDBLite consensus disorder prediction 492 637 - -
Arst8g01032 696 MobiDBLite consensus disorder prediction 537 556 - -
Arst8g01032 696 MobiDBLite consensus disorder prediction 514 531 - -
Arst8g01032 696 Gene3D - 308 361 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01032 Arst-Chr8 14306475 14312602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01032 25 656 Mechanosensitive Ion Channel Family AT1G58200 50.000 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01032 K22047 - gmx:100797302 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01032 8 14306475 14312602 Arst8g01032 8 14306475 14312602 ECH