Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01031 ATGATGTTGTGCTCATTCCATCATCATCACCTTTGGCTTCAGTTCCATTCAACAATGGCCTATTCGGGTTCACATAGGCTACATAGCAATATCGAAAGCTGCGGTTTTTGTCATAAGCCCATGTGTGCAGATCGATTATGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTACCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGTGCCTGAGCAGGACTCTATTTCTGCAAACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTAAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTGTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTCCGAAGAGTACCTTCGAGTTAAGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCTATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATAACAAGTTTGAGGAAACCTTGACATCTGACTTGAGAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGCGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCATGATAATTTGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAAGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGGACACTTGAAATAGACGACAAAGTTAGTCCACCTATCCCTGCAGAGCCTCCAGAATTCGCTATCCAGCAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2088 0.4176 MMLCSFHHHHLWLQFHSTMAYSGSHRLHSNIESCGFCHKPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLPRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLCLSRTLFLQTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDNKFEETLTSDLRVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDHDNLVQKTSKSMQPKEKAGSAGNKTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKVSPPIPAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01031 695 MobiDBLite consensus disorder prediction 655 695 - -
Arst8g01031 695 MobiDBLite consensus disorder prediction 675 689 - -
Arst8g01031 695 MobiDBLite consensus disorder prediction 491 636 - -
Arst8g01031 695 MobiDBLite consensus disorder prediction 536 555 - -
Arst8g01031 695 MobiDBLite consensus disorder prediction 513 530 - -
Arst8g01031 695 Pfam Mechanosensitive ion channel 249 458 IPR006685 GO:0016020|GO:0055085
Arst8g01031 695 MobiDBLite consensus disorder prediction 568 612 - -
Arst8g01031 695 SUPERFAMILY Sm-like ribonucleoproteins 292 362 IPR010920 -
Arst8g01031 695 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 38 675 IPR045042 -
Arst8g01031 695 Gene3D - 307 360 IPR023408 -
Arst8g01031 695 Gene3D - 201 306 - -
Arst8g01031 695 MobiDBLite consensus disorder prediction 491 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01031 Arst-Chr8 14306475 14312602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01031 25 655 Mechanosensitive Ion Channel Family AT1G58200 49.696 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01031 K22047 - gmx:100797302 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01031 8 14306475 14312602 Arst8g01031 8 14306475 14312602 ECH