Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01030 ATGGCCTATTCGGGTTCACATAGGCTACATAGCAATATCGAAAGCTGCGGTTTTTGTCATAAGCCCATGTGTGCAGATCGATTATGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTACCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGTGCCTGAGCAGGACTCTATTTCTGCAAAAGACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTAAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTGTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTCCGAAGAGTACCTTCGAGTTAAGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCTATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATAACAAGTTTGAGGAAACCTTGACATCTGACTTGAGAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGCGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCATGATAATTTGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAAGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGGACACTTGAAATAGACGACAAAGTTAGTCCACCTATCCCTGCAGAGCCTCCAGAATTCGCTATCCAGCAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2037 0.4178 MAYSGSHRLHSNIESCGFCHKPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLPRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLCLSRTLFLQKTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDNKFEETLTSDLRVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDHDNLVQKTSKSMQPKEKAGSAGNKTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKVSPPIPAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01030 678 MobiDBLite consensus disorder prediction 551 595 - -
Arst8g01030 678 Gene3D - 184 289 - -
Arst8g01030 678 MobiDBLite consensus disorder prediction 474 619 - -
Arst8g01030 678 MobiDBLite consensus disorder prediction 658 672 - -
Arst8g01030 678 Pfam Mechanosensitive ion channel 232 441 IPR006685 GO:0016020|GO:0055085
Arst8g01030 678 MobiDBLite consensus disorder prediction 474 495 - -
Arst8g01030 678 MobiDBLite consensus disorder prediction 519 538 - -
Arst8g01030 678 MobiDBLite consensus disorder prediction 638 678 - -
Arst8g01030 678 Gene3D - 290 343 IPR023408 -
Arst8g01030 678 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 23 658 IPR045042 -
Arst8g01030 678 MobiDBLite consensus disorder prediction 496 513 - -
Arst8g01030 678 SUPERFAMILY Sm-like ribonucleoproteins 275 345 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01030 Arst-Chr8 14306475 14312602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01030 7 638 Mechanosensitive Ion Channel Family AT1G58200 50.000 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01030 K22047 - gmx:100797302 818.535