Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g01025 | ATGGCTTCTTCTTCTTTTTCATTCTTCTCGTTTTTAATAACATTCACTTTTCTTCTACTTGCTAACCTCAGCACTGTTGCATATGCAGTGGCTAATCAAACTAGAGAAACGCCGCCGCCGCCACCGCCACCACCGCCGCCGGATTCCCAAAGAACTTCATCCGCCTTCAAACCAGGCATGGCGGTGGTAGTTGGCATATTAACCACCATGTTCTCTCTCACCTTCCTCCTCCTCCTCTACATCAAGCACTGCAACGGCGGCGCCACCGACTCCACCGGAGCTACCGGAACCCGCTACAATTACACCTCACGCGCGGCAACGTTCGCTGGAAGAAAAAACTCCGGCATCGACCGTTCCATAGTGGAATCGCTTCCAATCTTCAGATTCGGGTCCCTCCGAGGACAAAAAGAAGGACTCGATTGCGCGATTTGTCTCGCAAAATTCGAGTCCTCTGAGGTCCTCCGGCTCCTCCCGAAATGCAAGCACGCGTTCCACGTGGAGTGCGTGGACACGTGGCTTGACGCGCACTCCACGTGTCCTTTGTGCCGGCATCGAGTGGATCCGGAGGACATTCTTCTGGTGGAAGACAACAATGCAGCCGCACCGGTGCACCCTCAGAGCGAGAACGAAGCGTGTTCGGAGAGGTACGAAACACGGCGAGTCTCCGGAAGGCATTCGTGGGTTGGTGAGAAAGAAGGAGGGTTCTTGGAGATCATTGTTGAGAACGAGAACGAAACAGAACGACGAAACGCAGCGCCAACGTCGTCGTTTAGGAGGTCGCTTGATAGTGCCACGTGTGCAACGACATCGAAATCGAATAATAATAATAATAACAAGAAGTGGTTAATGCGTCCAAGAAAAGACGGGATGCTGTTGGTGAAAACGACGACGCATCAGGAAGCGGAGAAAGAGAAAGAAAGGAGGAGCACCGGTGCGGAACGGAGGTTGGAGCACAGGATAATTGTCTCTCCTACCCCTAAACAATGCGGTTACGATTATAATGGTTTGTTGCGAGGGCAGTTACAACGGTGGAGCGATGTTCAGCCGTCGGATCTACTTTACCTGACATCGGAGATGATAATAAGTAAGCATAATAACGGTAGTGGTGCTGAAATCGGGGGCAATTTGGTAATTAACACGAGGAGTATGTCTGAGATAACGGGATTGAGCAGGTTTGTGAGGAACGGTAACGGTAACGGTAGTAACAGGGAAGAAGAACAAGGAGGAGGAAGAAGAAGAGAAGAGGGGGTTGTTACGAGGTGGCTGGGATGGATATCAAGGACGCAGACACAGCCAGCTGTACGGTAG | 1308 | 0.5138 | MASSSFSFFSFLITFTFLLLANLSTVAYAVANQTRETPPPPPPPPPPDSQRTSSAFKPGMAVVVGILTTMFSLTFLLLLYIKHCNGGATDSTGATGTRYNYTSRAATFAGRKNSGIDRSIVESLPIFRFGSLRGQKEGLDCAICLAKFESSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRHRVDPEDILLVEDNNAAAPVHPQSENEACSERYETRRVSGRHSWVGEKEGGFLEIIVENENETERRNAAPTSSFRRSLDSATCATTSKSNNNNNNKKWLMRPRKDGMLLVKTTTHQEAEKEKERRSTGAERRLEHRIIVSPTPKQCGYDYNGLLRGQLQRWSDVQPSDLLYLTSEMIISKHNNGSGAEIGGNLVINTRSMSEITGLSRFVRNGNGNGSNREEEQGGGRRREEGVVTRWLGWISRTQTQPAVR | 435 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g01025 | 435 | CDD | RING-H2_EL5-like | 140 | 183 | - | - | |
Arst8g01025 | 435 | Pfam | Ring finger domain | 140 | 183 | IPR001841 | - | |
Arst8g01025 | 435 | FunFam | RING-H2 finger protein ATL43 | 116 | 190 | - | - | |
Arst8g01025 | 435 | MobiDBLite | consensus disorder prediction | 33 | 54 | - | - | |
Arst8g01025 | 435 | MobiDBLite | consensus disorder prediction | 392 | 414 | - | - | |
Arst8g01025 | 435 | MobiDBLite | consensus disorder prediction | 246 | 287 | - | - | |
Arst8g01025 | 435 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 115 | 190 | IPR013083 | - | |
Arst8g01025 | 435 | MobiDBLite | consensus disorder prediction | 249 | 280 | - | - | |
Arst8g01025 | 435 | SMART | ring_2 | 141 | 182 | IPR001841 | - | |
Arst8g01025 | 435 | MobiDBLite | consensus disorder prediction | 35 | 51 | - | - | |
Arst8g01025 | 435 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 30 | 429 | - | - | |
Arst8g01025 | 435 | SUPERFAMILY | RING/U-box | 125 | 188 | - | - | |
Arst8g01025 | 435 | ProSiteProfiles | Zinc finger RING-type profile. | 141 | 183 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g01025 | Arst-Chr8 | 14171790 | 14173928 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g01025 | 53 | 434 | C3H Transcription Factor Family | AT5G05810 | 45.185 | 2.02e-82 | 257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g01025 | K19041 | - | cave:132189697 | 315.079 |