Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01020 ATGAAAGGAGAATATGTAGAACACCACCACCCTCCAAAGAGTGAACCACCAAACATGTTCTCAAAGCTTCACCACCAATCACCACCACATCAACATCAACATCAACATCAACATCAGCAGCATCCATTTTCTCTTCATAATCCATTCCAACACTTCTCAAGGGATCAATGCCAAGCTTCTGCGGCGCCGGAAGAAGATAGCCATGGTGGAGGCGGTGTAGGCGGCGCCGCCACTTCTCAGAAGCCGAACTCCTCCGGCGACGGAGCAACCATAGAGGTTGTGAGGAGGCCAAGAGGTCGCCCGCCGGGCTCCAAGAACAAGCCTAAACCGCCAGTGATCATAACGCGTGAGCCCGAGCCCGCCATGAGTCCGTACATTCTAGAAGTTTCCAGCGGAAACGACGTCGTTGAAGCGTTAGCCAGGTTCAGTCGGAGGAGGAACATGGGGATTTGCGTCCTTACTGGATCCGGAACCGTTGCTAACGTCACTCTCCGTCAGCCAGGAGCAGCTCCCGGAGCCACCGTTACGTTTCACGGCCGATTCGATATCTTATCTGTTTCCGCCACGTTTCTTCCGCAGCCGTCGCCCGCGGTTCCTACCGCCTTCGCCATCTCGCTTGCCGGACCGCAGGGGCAGATCGTCGGAGGACACGTCGCCGGAGGACTTATGGCTGCCGCCACGGTGTTTGTTGTGGCGGCTTCGTTCAACAA 710 0.5606 MKGEYVEHHHPPKSEPPNMFSKLHHQSPPHQHQHQHQHQQHPFSLHNPFQHFSRDQCQASAAPEEDSHGGGGVGGAATSQKPNSSGDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYILEVSSGNDVVEALARFSRRRNMGICVLTGSGTVANVTLRQPGAAPGATVTFHGRFDILSVSATFLPQPSPAVPTAFAISLAGPQGQIVGGHVAGGLMAAATVFVVAASFNNPSFHRLPPEEDARNDVSGGDGQSPAVSGGGGESGHGQAVDSCGMSMYSGVHHHLPAAASSDVIWTPTARAPPPPY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01020 312 PIRSF ESCAROLA 16 311 IPR014476 GO:0003680
Arst8g01020 312 MobiDBLite consensus disorder prediction 1 15 - -
Arst8g01020 312 MobiDBLite consensus disorder prediction 240 277 - -
Arst8g01020 312 MobiDBLite consensus disorder prediction 1 116 - -
Arst8g01020 312 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 237 IPR005175 -
Arst8g01020 312 MobiDBLite consensus disorder prediction 40 57 - -
Arst8g01020 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 302 IPR014476 GO:0003680
Arst8g01020 312 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 247 - -
Arst8g01020 312 ProSiteProfiles PPC domain profile profile. 119 256 IPR005175 -
Arst8g01020 312 FunFam AT-hook motif nuclear-localized protein 123 254 - -
Arst8g01020 312 Gene3D - 123 253 - -
Arst8g01020 312 CDD DUF296 124 222 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01020 Arst-Chr8 14096170 14097348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01020 87 310 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 65.812 9.88e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01020 - - adu:107460948 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01020 8 14096170 14097348 Arst8g01020 8 14096170 14097348 ECH