Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01008 ATGGCACCAAGCTTTGATTGCGTTTCAAGCCTGCTCTGTGCAGAGGACACAAGCTTCTTCGATGATAATCCTTATGGGGGTAGTGGTGGTGCCATGGATGAAGTGTTTGATGAGGATTCATGGCGTCCTAGGTGTTATAATAATAAAAAAGGTTGCAACTTTGATGGTGATGAGGCAGATGGGTATCCATTGCAGAGTGATGAGTGTGTGGCAGTGATGGTGGAAAAGGAGTGTGAACACTGGCATGGTGGTGCCGCTTACTTGAACAGGTTACAATCTGGGGATTTGGATTTTGGGGCCAGAAATGAGGCCATTCATTGGATTGAAAAGGTTCGAGCACATTTTGGTTTTGGACCTCTATGTGAATATCTATCTATAAATTACTTGGATCGATTCCTTTCATCGTATGAATTACCAAAGGGAAGAACATGGACAATGCAATTGCTGGCAGTGGCCTGTTTATCAATTGCAGCGAAAATTGATGAGACTGAAGTTCCTTTCACCCTTGATTTGCAGGTTGGTGAATCCAAGTTTGTATTCGAAGCTAAAACCATACAGAGAATGGAGCTTCTAGTACTAAGCACATTGAGGTGGAGAATGAATGCAATTACTCCATTCTCCTTCATTGATTATTTCCTTTCCAAGATCAATGATGGTAATGAGAGTCCATCATTAAGATCGTCGATCTTGCGATCCATCCAGCTTATCTTGAGTACCACAAGAGGGATTGAGTTCTTGGAGTTCAAGCCATCAGAGATTGCAGCGGCAGTGGCAATATCAGTTGTCGGGGAAACCGAACCGGTTGACACTGAGAAAACTACTTCTGTTCTGATTCAATACATAGATAAGGGGAGAGTGCTCAAGTGTCTTGAATTGATCAAGGAACTTGCGTTAAACATTGTGAATGTCAATGATCCAAATGGTTCTTCTTCTACAATCCCTTGTGGTGTGCCTCAAAGTCCAATAGGAGTGTTAGATGCATTGTGCTTCAGCTACAAAAGTGACGACTCAAATGCAGGTTCATGTGCAAGTTCTTCACACACAACTCCAGATCCTAAAAGGAGGAAGCTAAACAAAACTTGTGGATCAGAGGCACTATTGTAG 1104 0.4257 MAPSFDCVSSLLCAEDTSFFDDNPYGGSGGAMDEVFDEDSWRPRCYNNKKGCNFDGDEADGYPLQSDECVAVMVEKECEHWHGGAAYLNRLQSGDLDFGARNEAIHWIEKVRAHFGFGPLCEYLSINYLDRFLSSYELPKGRTWTMQLLAVACLSIAAKIDETEVPFTLDLQVGESKFVFEAKTIQRMELLVLSTLRWRMNAITPFSFIDYFLSKINDGNESPSLRSSILRSIQLILSTTRGIEFLEFKPSEIAAAVAISVVGETEPVDTEKTTSVLIQYIDKGRVLKCLELIKELALNIVNVNDPNGSSSTIPCGVPQSPIGVLDALCFSYKSDDSNAGSCASSSHTTPDPKRRKLNKTCGSEALL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01008 367 FunFam D6-type cyclin 198 291 - -
Arst8g01008 367 Pfam Cyclin, C-terminal domain 203 299 IPR004367 -
Arst8g01008 367 FunFam D2/4-type cyclin 84 197 - -
Arst8g01008 367 SMART Cyclin_C_2 203 331 IPR004367 -
Arst8g01008 367 PANTHER CYCLINS 67 294 IPR039361 -
Arst8g01008 367 MobiDBLite consensus disorder prediction 339 367 - -
Arst8g01008 367 Pfam Cyclin, N-terminal domain 71 201 IPR006671 -
Arst8g01008 367 CDD CYCLIN_AtCycD-like_rpt2 203 293 - -
Arst8g01008 367 Gene3D - 84 201 - -
Arst8g01008 367 SUPERFAMILY Cyclin-like 185 297 IPR036915 -
Arst8g01008 367 SUPERFAMILY Cyclin-like 64 201 IPR036915 -
Arst8g01008 367 SMART cyclin_7 106 194 IPR013763 -
Arst8g01008 367 CDD CYCLIN_AtCycD-like_rpt1 100 198 - -
Arst8g01008 367 Gene3D - 202 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01008 Arst-Chr8 13857119 13859896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01008 84 343 Core Cell Cycle Gene Families AT2G22490 53.409 4.42e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01008 K18810 - gmx:547739 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01008 8 13857119 13859896 Arst8g01008 8 13857119 13859896 ECH