Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01003 ATGGGTTATCTCTCTTGCAATGCCGACTCTGCAATCGCCACCTGTGACCCTAACTACTGCCATTTCAAGAACCGCAAAACCAACAACCTCCTTCAAATCCGCCACTTCCCTTACTCCGACATCCTCGCCGCAACTAAAACCTTCTCCGCCGATACCTTCCTCGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCACACTCGACGGCGGCAAGCTCATCGCCGCCGTCAAGAAAACTAAGCACGCCAAACCATCATCACGCCGTCACCAAAGTACCGCTGCAGCATCTTGCACCGGTTGCGGCAACTGCACCAGCCCGGCGGAGAACGAGATCGAGATCCTCTCTCGCGTCTTTAGCCCCCGCCGGCTAGTGAACCTCATCGGATTCTGCACCGATCCAAGCAACGGCGGCAAGCTCATCGTCGTCGAGTACATGCCGAACGGCTCCCTCCACGACCTCCTACACTCGCCGGTCCGACCGCCCGGTTGGACCGCACGCGTCCGGCTCGCACTTCAAATCGCGAAGGCGGTTCACGCGCTTCACACATCAAACCCTCCGGTGATCCACAGAGACATTAAATCTTCCAACGTTCTCATCGACGGAGCGTGGAACGCGAGGCTCGGAGACTTTGGGCTCGCGCTGAGAGGACACGTGGAGGACGTGCGCGTGAAGTGCACACCGCCAGCTGGCACGTTAGGGTACCTTGATCCTTGCTATCTTGCGCCCGAGGATCTGAGCGCTAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTGTTAGAGATTCTCAGCGGCAGGAACGCCATCGACGTGAACTTCAGTCCGCCATCGGTGGTCGACTGGGCAGTGCCGTTGATTAAGAGAGGAGAGTTCGCCGTCATTTGCGACAGGCGAATCGGAGCGCCGTCGGATAAAGAGGTGGTTCGAATGGTGGCGGTGATGGCGGCCATGTGCGTGAGGTCCACGGCGGAGAAGAGGCCGTCGATGGAGGAGGTTGTGCAGTGCTTGAAGATTGCAAGGAAGAGAATGCGCGCGGTGCCGATATGGAGTGGATTGAGGTGGCGCGTGAGGCGCGTGGAAAGTGAGAAACGGTTAGAATGGGAAGCGCGTGAGTGTGACAGTTATTACGATAGGAGTGAGGAGGAGGTAGTGAGAGCGGCGAAGGGTGGTGTGAGTAGAAGGAAGAAAAACAGGAAGGTATCCAATGTGACGGGTGCAGAGTATTATGGTAGACCCTCATCCAATCATGTAGTGAGGTCAAAGTCAATTGGTGCGGGTTCTCTGAAAGTAAATTCGGATTCGGGAAGTTCGCGGTCGCAACAAAACGGGTCGGGTTTCGTGAGGAGAAGGTCGAAGCTTAACAAGTCTAGGTCCATGGGGGTGTTGCAAGGTTCTTCTCGTTTATCATCACATTATTATGAAAGTGATCCAATACATTCGTTAGAAACGGCAATGTTGTCTAAGTGGGTCATTACGGATAAGTTGGAAAAAAAACTGCTTGAGAAACCGTTAGTTAATTCTGTTGGAATTAATTAA 1533 0.544 MGYLSCNADSAIATCDPNYCHFKNRKTNNLLQIRHFPYSDILAATKTFSADTFLGKGSHGSVYKATLDGGKLIAAVKKTKHAKPSSRRHQSTAAASCTGCGNCTSPAENEIEILSRVFSPRRLVNLIGFCTDPSNGGKLIVVEYMPNGSLHDLLHSPVRPPGWTARVRLALQIAKAVHALHTSNPPVIHRDIKSSNVLIDGAWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEILSGRNAIDVNFSPPSVVDWAVPLIKRGEFAVICDRRIGAPSDKEVVRMVAVMAAMCVRSTAEKRPSMEEVVQCLKIARKRMRAVPIWSGLRWRVRRVESEKRLEWEARECDSYYDRSEEEVVRAAKGGVSRRKKNRKVSNVTGAEYYGRPSSNHVVRSKSIGAGSLKVNSDSGSSRSQQNGSGFVRRRSKLNKSRSMGVLQGSSRLSSHYYESDPIHSLETAMLSKWVITDKLEKKLLEKPLVNSVGIN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01003 510 SUPERFAMILY Protein kinase-like (PK-like) 30 336 IPR011009 -
Arst8g01003 510 Pfam Protein kinase domain 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01003 510 MobiDBLite consensus disorder prediction 387 412 - -
Arst8g01003 510 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Arst8g01003 510 MobiDBLite consensus disorder prediction 425 448 - -
Arst8g01003 510 PANTHER OS01G0253100 PROTEIN 28 338 - -
Arst8g01003 510 MobiDBLite consensus disorder prediction 425 461 - -
Arst8g01003 510 SMART serkin_6 48 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01003 510 FunFam Serine/threonine-protein kinase-like protein 145 348 - -
Arst8g01003 510 ProSiteProfiles Protein kinase domain profile. 48 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01003 510 Gene3D Transferase(Phosphotransferase) domain 1 145 346 - -
Arst8g01003 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Arst8g01003 510 Gene3D Phosphorylase Kinase; domain 1 20 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01003 Arst-Chr8 13674555 13676890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01003 34 346 Receptor kinase-like Gene Family AT3G59420 39.937 6.27e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Arst8g01003 Pkinase 7.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01003 - - ahf:112706221 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01003 8 13674555 13676890 Arst8g01003 8 13674555 13676890 PCT