Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01002 ATGGAATTTGACGAGCACGAAGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCCGCCTGCGCCGCAGGGTTATGACTCGTTTGGAAACTCGGCGGCGAGGTCCAAATCAGAAGGAGGAGGAGGAGGAGCTGCCGCCGTGACACCTGGTCGGAAAGGTGGAACCGCCGTCAGGTACAGAGAATGTCAGAAGAATCACGCGGTCAGTATCGGCGGCCACGCCGTTGACGGTTGCTGCGAGTTTCTAGCCGCCGGAGGGGAAGGAACACTGGAGGCCGTGATCTGCGCTGCCTACCACCAACACCATCAATTCTCCCCTTACTACCACCGCGCACCGCCTCCTCCTACCGGCGGATACCTCCACCTGTCAACTCCGCCGGTGTCGCAGCACCGGCCTCTAGCTCTTCCAGCAGCCGCATCAGGCGGCGGTGGATTCTACAAAGAGGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGCGGCGGCGGTAGCGGAAGCGGAACAAAGAAGAGGTTTAGAACGAAATTCACACAGGAGCAGAAGGATAAGATGCTTGCATTCGCAGAGCAGTTAGGGTGGAGAATCCAGAAGCATGATGAATCTGCAGTTGAGAATTTCTGCGCTGAAACCGGTGTTAAGAGACATGTTCTCAAGGTTTGGATGCATAACAATAAGCACACTCTCGGTAAGAAACCCTAA 705 0.5645 MEFDEHEDQEEEEMGIPEPPPAPQGYDSFGNSAARSKSEGGGGGAAAVTPGRKGGTAVRYRECQKNHAVSIGGHAVDGCCEFLAAGGEGTLEAVICAACNCHRNFHRKEIDGETSPYHQNTPRPQQPPQPPLHHHQYHQHHQFSPYYHRAPPPPTGGYLHLSTPPVSQHRPLALPAAASGGGGFYKEEEDMSNPSSSGGGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVENFCAETGVKRHVLKVWMHNNKHTLGKKP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01002 272 MobiDBLite consensus disorder prediction 1 53 - -
Arst8g01002 272 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 268 - -
Arst8g01002 272 MobiDBLite consensus disorder prediction 1 15 - -
Arst8g01002 272 Gene3D - 194 269 - -
Arst8g01002 272 FunFam Zinc-finger homeodomain protein 2 201 270 - -
Arst8g01002 272 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
Arst8g01002 272 SUPERFAMILY Homeodomain-like 195 270 IPR009057 -
Arst8g01002 272 NCBIfam homeobox domain, ZF-HD class 209 265 IPR006455 -
Arst8g01002 272 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 109 IPR006456 -
Arst8g01002 272 MobiDBLite consensus disorder prediction 112 210 - -
Arst8g01002 272 Pfam ZF-HD protein dimerisation region 58 110 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01002 Arst-Chr8 13665452 13667006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01002 7 268 ZF-HD Transcription Factor Family AT4G24660 52.091 1.29e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst8g01002 ZF-HD_dimer 9.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01002 - - pvu:PHAVU_009G037900g 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01002 8 13665452 13667006 Arst8g01002 8 13665452 13667006 ECH
Arst7g02470 7 61270316 61273133 Arst8g01002 8 13665452 13667006 PCT