Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00976 ATGGCGCTACTCTCTAGTCTTTGCATTCCTTCAACCACGCACCTCTCTACGCACAACCATTCTTTCTCATCATTCTCCAACATTCACAACCATTCCATCACCACCATCAATCCATTCTCTTCCTTTCAATCCCTGCAATTATCACTTCCTTATCACACCCCAACACTCCTCACAACCAAACAAAACCCTAATTTCACTCTCAGATTTTCCCAACAGGCTCAGGCTGAGGCTGAAGCAGCACCTAGTGTCTCCACCGACGAACATGCAGAGCAAGAGGTTTCCCAGACTAGGTTGCTCGCCCAGAACGTGCCATGGACAAGCACCCCTGAAGACATTCGTTCTTTGTTCGAGAGATATGGAAAAGTGCTCCAAGTTGAGCTCTCAATGTATAACAAGACGAAGAACAGGGGTTTGGCATTTGTGGAAATGAGTTCACCAGAAGAGGCTCGTGCCGCTCTCCAGAATCTCGAATCGTATGAGTTTGATGGCCGGATATTAAAACTCAATTACGCTCATATAAAAAAGAAGAAAACTCCACCACCCGTGAAACCAAAGCCTGTGACATTTAACTTGTTTGTTGCAAACTTGCACTATGAAGCAAGGTCTAAAGATCTCAAGGAATTTTTTGATGATGGAAGTGGTAGCGTTGTTTCTGCAGCAGTTATATTTCATGATAACCCTAGAAGGTCATCTGGCTATGGTTTTGTGGCCTTCAAATCCAAGAAACAAGCTGATTCAGCACTTAATGAGTTCCAAGGGAAGATCTTTATGGGAAGACCAATCAGGGTAGCTCGTGGTAGGCAATTTGTTAAAGAACGAGCAAAGGAGGGTGAAACATCTGAAGATACGGCTTCTGAGTTGAATGGTGAAGAAGCTGACAAGGCTGATTGA 891 0.4433 MALLSSLCIPSTTHLSTHNHSFSSFSNIHNHSITTINPFSSFQSLQLSLPYHTPTLLTTKQNPNFTLRFSQQAQAEAEAAPSVSTDEHAEQEVSQTRLLAQNVPWTSTPEDIRSLFERYGKVLQVELSMYNKTKNRGLAFVEMSSPEEARAALQNLESYEFDGRILKLNYAHIKKKKTPPPVKPKPVTFNLFVANLHYEARSKDLKEFFDDGSGSVVSAAVIFHDNPRRSSGYGFVAFKSKKQADSALNEFQGKIFMGRPIRVARGRQFVKERAKEGETSEDTASELNGEEADKAD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00976 296 Gene3D - 176 294 IPR012677 -
Arst8g00976 296 SUPERFAMILY RNA-binding domain, RBD 96 264 IPR035979 GO:0003676
Arst8g00976 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 173 IPR000504 GO:0003723
Arst8g00976 296 SMART rrm1_1 190 264 IPR000504 GO:0003723
Arst8g00976 296 SMART rrm1_1 97 169 IPR000504 GO:0003723
Arst8g00976 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 191 262 IPR000504 GO:0003723
Arst8g00976 296 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 101 166 IPR000504 GO:0003723
Arst8g00976 296 PANTHER OS02G0815200 PROTEIN 34 265 - -
Arst8g00976 296 MobiDBLite consensus disorder prediction 271 296 - -
Arst8g00976 296 CDD RRM_SF 191 263 - -
Arst8g00976 296 Gene3D - 58 175 IPR012677 -
Arst8g00976 296 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 189 268 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00976 Arst-Chr8 13283011 13285666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00976 79 263 Eukaryotic Initiation Factors Gene Family AT3G16380 30.612 2.89e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00976 - - lang:109340717 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00976 8 13283011 13285666 Arst8g00976 8 13283011 13285666 ECH