Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00975 ATGGCGCTACTCTCTAGTCTTTGCATTCCTTCAACCACGCACCTCTCTACGCACAACCATTCTTTCTCATCATTCTCCAACATTCACAACCATTCCATCACCACCATCAATCCATTCTCTTCCTTTCAATCCCTGCAATTATCACTTCCTTATCACACCCCAACACTCCTCACAACCAAACAAAACCCTAATTTCACTCTCAGATTTTCCCAACAGGCTCAGGCTGAGGCTGAAGCAGCACCTAGTGTCTCCACCGACGAACATGCAGAGCAAGAGGTTTCCCAGACTAGGTTGCTCGCCCAGAACGTGCCATGGACAAGCACCCCTGAAGACATTCGTTCTTTGTTCGAGAGATATGGAAAAGTGCTCCAAGTTGAGCTCTCAATGTATAACAAGACGAAGAACAGGGGTTTGGCATTTGTGGAAATGAGTTCACCAGAAGAGGCTCGTGCCGCTCTCCAGAATCTCGAATCGTATTTTGATGGCCGGATATTAAAACTCAATTACGCTCATATAAAAAAGAAGAAAACTCCACCACCCGTGAAACCAAAGCCTGTGACATTTAACTTGTTTGTTGCAAACTTGCACTATGAAGCAAGGTCTAAAGATCTCAAGGAATTTTTTGATGATGGAAGTGGTAGCGTTGTTTCTGCAGCAGTTATATTTCATGATAACCCTAGAAGGTCATCTGGCTATGGTTTTGTGGCCTTCAAATCCAAGAAACAAGCTGATTCAGCACTTAATGAGTTCCAAGGGAAGGTAACTCTCAAGATCTTTATGGGAAGACCAATCAGGGTAGCTCGTGGTAGGCAATTTGTTAAAGAACGAGCAAAGGAGGGTGAAACATCTGAAGATACGGCTTCTGAGTTGAATGGTGAAGAAGCTGACAAGGCTGATTGA 900 0.4422 MALLSSLCIPSTTHLSTHNHSFSSFSNIHNHSITTINPFSSFQSLQLSLPYHTPTLLTTKQNPNFTLRFSQQAQAEAEAAPSVSTDEHAEQEVSQTRLLAQNVPWTSTPEDIRSLFERYGKVLQVELSMYNKTKNRGLAFVEMSSPEEARAALQNLESYFDGRILKLNYAHIKKKKTPPPVKPKPVTFNLFVANLHYEARSKDLKEFFDDGSGSVVSAAVIFHDNPRRSSGYGFVAFKSKKQADSALNEFQGKVTLKIFMGRPIRVARGRQFVKERAKEGETSEDTASELNGEEADKAD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00975 299 MobiDBLite consensus disorder prediction 275 299 - -
Arst8g00975 299 CDD RRM_SF 190 266 - -
Arst8g00975 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 172 IPR000504 GO:0003723
Arst8g00975 299 SMART rrm1_1 189 267 IPR000504 GO:0003723
Arst8g00975 299 SMART rrm1_1 97 168 IPR000504 GO:0003723
Arst8g00975 299 Gene3D - 176 297 IPR012677 -
Arst8g00975 299 SUPERFAMILY RNA-binding domain, RBD 96 268 IPR035979 GO:0003676
Arst8g00975 299 Gene3D - 57 175 IPR012677 -
Arst8g00975 299 PANTHER OS02G0815200 PROTEIN 34 268 - -
Arst8g00975 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 188 271 IPR000504 GO:0003723
Arst8g00975 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 101 159 IPR000504 GO:0003723
Arst8g00975 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 190 254 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00975 Arst-Chr8 13283011 13285666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00975 79 279 Eukaryotic Initiation Factors Gene Family AT3G16380 29.680 1.92e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00975 - - lang:109340717 297.36