Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00963 ATGGCATGCAATAGCAGTGAAAATATTGGCAAACCAATCAGATGCAAAGCTGCAATATGCAGAAAAGCAGGTGAACCTCTTGTTATAGAGGAAATTGAGGTTGACCCACCAAAAGCTTGGGAGGTTCGGATCAAGATTCTACTCACTTCTCTGTGTCACACTGATGTAACCATCTGGAAAATAGACCACGTCAGTGCAGCAAAATTTCCAAGAATTTTCGGTCATGAAGCCGTAGGAGTTGTGGAGAGCGTAGGGGAGCACGTGAAAGAAGTGAAAGAAGGAGACAGAGTAGTCCCTGTGTTTCTGGCGAACTGCGAGGAATGCAGGGACTGCAAGAGTTCTAAGAGCAACGAGTGCTCCAAATTCCGGAAGGAGTTTTTCAGTGTAATGCCGAGAGATGGAACGAGCAGATTCAGGGATATGAATGGAGAAACGGTGCACCATACCTTGTGTGTTTCGAGCTTCTCAGAGTACACAGTTGTGGATGTGGCTCATTTGGTCAACATTAGCCATTATCACCTTCCTCCTCACGAGGCTTGCTTGCTCAGTTGTGGTGTTTCAACAGGGTTGGGAGCGGCATGGAAAGTGGCCGACGTGGAAGAAGGGTCGACAGTGGCTATTTTTGGGCTAGGAGCTGTAGGCCTTGCGGTTGCTGTAGGAGCAAAACAACGAGGAGCAACAAAGATCATAGGCGTGGATATTAATCATGAAAAATTTGAAATAGGAAAAAGATTTGGAATTACTGATTTTGTGAATCCCTCCACTTGTGAAGACAAGTCAGTGAGCGAGGTGATTAACGAAATGACAGATGGAGGTGCTGATTACTGCTTCGAGTGCATAGGGTTGGCTTCACTGATGGCAGAGGCTTTTAACAGTAGTCGGAATGGTTGGGGGAAAACCGTGATATTAGGGGTGGAAATGCATGGTTCGCAAGTGACATTGAATCCTTATCTGTTGTCGAGAGGCAGAACAATCACAGGATCAATGTTTGGAGGTCTCAAACCCAAATCTGATATCCCCCTCCTTGCTAATAAGTACTTGGACAAAGAATTTAGCTTGGAGGGATTCATAACGCACGAGGTGCCCTTCAAGGACATTAACAAAGCTTTTGACTATCTCCACCAAGGAAAGAGCCTCCGCTGCATTATAAAGATGGATCCTTAA 1164 0.4562 MACNSSENIGKPIRCKAAICRKAGEPLVIEEIEVDPPKAWEVRIKILLTSLCHTDVTIWKIDHVSAAKFPRIFGHEAVGVVESVGEHVKEVKEGDRVVPVFLANCEECRDCKSSKSNECSKFRKEFFSVMPRDGTSRFRDMNGETVHHTLCVSSFSEYTVVDVAHLVNISHYHLPPHEACLLSCGVSTGLGAAWKVADVEEGSTVAIFGLGAVGLAVAVGAKQRGATKIIGVDINHEKFEIGKRFGITDFVNPSTCEDKSVSEVINEMTDGGADYCFECIGLASLMAEAFNSSRNGWGKTVILGVEMHGSQVTLNPYLLSRGRTITGSMFGGLKPKSDIPLLANKYLDKEFSLEGFITHEVPFKDINKAFDYLHQGKSLRCIIKMDP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00963 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Arst8g00963 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 189 328 - -
Arst8g00963 387 Pfam Zinc-binding dehydrogenase 212 335 IPR013149 -
Arst8g00963 387 PANTHER ALCOHOL DEHYDROGENASE 10 383 - -
Arst8g00963 387 Gene3D - 18 380 - -
Arst8g00963 387 FunFam Alcohol dehydrogenase 6 18 203 - -
Arst8g00963 387 Gene3D - 189 328 - -
Arst8g00963 387 SUPERFAMILY GroES-like 9 195 IPR011032 -
Arst8g00963 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Arst8g00963 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 348 IPR036291 -
Arst8g00963 387 SUPERFAMILY GroES-like 336 383 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00963 Arst-Chr8 13194266 13199369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00963 41 373 Monolignol Biosynthesis Gene Families AT2G21890 26.488 1.04e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00963 K00121 - qsu:112023922 572.392