Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00944 ATGGCATATCCGCATTACCGGCCACATCAGTTCGGAGACACCACATTCACCAAACTCTTCGTTGGAGGCTTAGCTTGGGAGACTCCAACTGAAGAACTCAGAAAGTACTTTGACCAGTTCGGTGAAATCCTTGAAGCCGTTATCATCACTGATAAGAACACAGGAAAATCCAAAGGCTACGGTTTCGTAACGTTCCGCGATCAAGAATCAGCAAGGAGAGCATGTTCTGATCCAAACCCAGTGATTGATGGAAGAAGAGCGAATTGTAATATTGCTTCTCTTGGCAGGACTCGACCATCACCACCCCGAGGCAGGAACTATATGGTTCAAGGAGGAGGAGGAGCACAACAGGGGGCGTCGTACGGCGGTGTTCCGGCGGGAGCAGGACCGTCATCATTGGCAGCAGCACCACCACTAATGTACCCGCCACCGTATGGCTACCCAACCTACACTCCTGAATACGGGTACCACCACCAAGCGACATTGTACACCCCACAGATGCAGCAAGCACAATATTATCATCATCAACAACAACAAATATATGGATCACCATCATCCGCTATGGGATCACCATATTACTATGGTGGTTACTCAATGCAAGCACCAAGAAGCACATTACTTTCTTCACCGCAGCATGCAAATCGTTTACCACCACCAGCTGCAGCTGCCGGACCCTCCTATGTATACTACCCTACCACACCAATGGAACCCTCCTCCTTCACTCCTTACCATCATCATCCTCTCCAACAACCAACAATAAGGCATCCCTTTCCATCTCCTACTGATCTACAAACTCAGCAGCAGCAACGAACATCATCATCATCAACTGAAACAGCAGCAGCTGGAGGAGTAGTTATAACTTCATCAGAAAGTTCGAATACCCAGCAAGGGAAGAAGAATAACTAA 906 0.4812 MAYPHYRPHQFGDTTFTKLFVGGLAWETPTEELRKYFDQFGEILEAVIITDKNTGKSKGYGFVTFRDQESARRACSDPNPVIDGRRANCNIASLGRTRPSPPRGRNYMVQGGGGAQQGASYGGVPAGAGPSSLAAAPPLMYPPPYGYPTYTPEYGYHHQATLYTPQMQQAQYYHHQQQQIYGSPSSAMGSPYYYGGYSMQAPRSTLLSSPQHANRLPPPAAAAGPSYVYYPTTPMEPSSFTPYHHHPLQQPTIRHPFPSPTDLQTQQQQRTSSSSTETAAAGGVVITSSESSNTQQGKKNN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00944 301 FunFam RNA-binding protein 24-B isoform X1 3 114 - -
Arst8g00944 301 SMART rrm1_1 18 90 IPR000504 GO:0003723
Arst8g00944 301 SUPERFAMILY RNA-binding domain, RBD 6 121 IPR035979 GO:0003676
Arst8g00944 301 CDD RRM_RBM24_RBM38_like 17 92 - -
Arst8g00944 301 PANTHER BOULE-RELATED 11 273 - -
Arst8g00944 301 Gene3D - 4 115 IPR012677 -
Arst8g00944 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 94 IPR000504 GO:0003723
Arst8g00944 301 MobiDBLite consensus disorder prediction 240 301 - -
Arst8g00944 301 MobiDBLite consensus disorder prediction 255 301 - -
Arst8g00944 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 76 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00944 Arst-Chr8 12948741 12953590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00944 13 93 C2H2 Transcription Factor Family AT2G19380 40.741 1.30e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00944 K25006 - gmx:100787086 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00944 8 12948741 12953590 Arst8g00944 8 12948741 12953590 ECH
Arst8g00944 8 12948741 12953590 Arst8g00945 8 12948741 12953590 PCT