Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00928 ATGGGAAGGTCTCCATGCTGCGATGAGAGTGGCCTTAAGAAAGGTCCATGGACTCCTGAAGAAGATCAAAAGCTTGTTCACCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCTAAGTTAGCGGGTCTTAATAGATGTGGCAAGAGCTGTAGACTTAGGTGGACTAACTATTTGAGGCCTGATATTAAGAGGGGCAAATTCTCCCAAGAAGAGGAGCAAACCATTCTCCATCTTCATTCCATTCTTGGAAACAAGTGGTCAGCAATTGCGACCCATCTTCCGGGGAGAACAGACAACGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATCCAGATGGGTTTTGATCCAATGACTCATCAACCAAGAACTGACCTTGTTTCTACCCTCCCATACCTCATAGCTTTGGCAAGCATGATGGATACATCATCATCAATTGATGAACATGCTCTGAGCTTACAAGCAGAGGCAATTCAAATGGCAAAGCTTCAGTACCTTCATTACTTACTCCAATCTTCCTCATCAAATTCCAACCTTGCCTTGGACCAACAAAACAATCCCATCAACATCACAAACATGGAACCTCCTTTCAGTTTGTTAAATGTGAAAGAGAATATTAATACTAATAATAATAATAATAATAATGGTCCTTCTTCATTTCCTCATCATCATCATCATGGGAATGGGATTCTTATTGATGATGATAGTAGCTGTCAACCACTCCACTACCACCCAAACTTGCTATTATCTCACTTTTTAGACCCACCATCACAACAAGTCTCTTTCAATTCCCAATCATGTTTGAATAATATTAATGAGCAAGGTCAAGGTTCTACTACTAACTATGCAATCATAAGTCAAATGGATCACACAACAGCTGATGATAATTCCTCCTGGATTCTTCCATCTTCTTCTCCATTGTCATCTATTGCTCCAAATAATAATGGACCCTCTACTACTACTAGTAACAATAATAATCCAGGAGATACAAGCAGCACCACTTCTAGCTATGGAGGAGGAGGAGGACCTGCTTCTTCCTCCTCTTCTTATTGGTCTGAACTCTTTCTTGTGGACCCTACTATCATGCATGAGCTACCTTAA 1119 0.4066 MGRSPCCDESGLKKGPWTPEEDQKLVHHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLIALASMMDTSSSIDEHALSLQAEAIQMAKLQYLHYLLQSSSSNSNLALDQQNNPINITNMEPPFSLLNVKENINTNNNNNNNGPSSFPHHHHHGNGILIDDDSSCQPLHYHPNLLLSHFLDPPSQQVSFNSQSCLNNINEQGQGSTTNYAIISQMDHTTADDNSSWILPSSSPLSSIAPNNNGPSTTTSNNNNPGDTSSTTSSYGGGGGPASSSSSYWSELFLVDPTIMHELP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00928 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 266 - -
Arst8g00928 372 CDD SANT 69 112 IPR001005 -
Arst8g00928 372 CDD SANT 16 61 IPR001005 -
Arst8g00928 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst8g00928 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst8g00928 372 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst8g00928 372 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst8g00928 372 FunFam MYB-related transcription factor 13 66 - -
Arst8g00928 372 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst8g00928 372 MobiDBLite consensus disorder prediction 214 234 - -
Arst8g00928 372 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst8g00928 372 FunFam Transcription factor MYB39 69 130 - -
Arst8g00928 372 SMART sant 13 63 IPR001005 -
Arst8g00928 372 SMART sant 66 114 IPR001005 -
Arst8g00928 372 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst8g00928 372 Gene3D - 11 67 - -
Arst8g00928 372 Gene3D - 69 116 - -
Arst8g00928 372 MobiDBLite consensus disorder prediction 299 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00928 Arst-Chr8 12807230 12809101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00928 1 368 MYB Transcription Factor Family AT1G34670 52.010 5.13e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g00928 Myb_DNA-binding 2.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00928 K09422 - gmx:100782792 387.882