Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00909 ATGAAGAATCATGAGAATAATGTGGTAGGTCCTGATGTGATGCTAATTGCATTAGCAGCATCCATTCCAAATGCAGCCGTTTTTGGGGGCTTTCTCAATCTCTCTTCTTCACAGATCAAAGACACTAACAACTGGATTGATTCAATCAGAGCTTCTTCTCCAACTCGCACTAGATCATCTTCTTCTTCCGATAACCAAGACAAAATTAATTCTTGGATGCTCTATCATCCTTCGGCGCTGAACATGTTTGATCAGATAGCATATAACATGAAAGGGAAGAAGATTGTAACCTTTCTTGACTACGATGGAACTCTGTCCCCTATTGTTGCCGATCCTGATAAAGCTTTCATGACCAAAAAGATGAGAGCCACGCTGAAGGACATAGCAAGGCATTTCCCCACCGCAATCGTCACCGGAAGGTGCAGAGACAAGGTGTATAGCTTTGTGAAATTGGCACAACTTTACTACGCAGGAAGCCATGGAATGGACATAAAGGGGCCAACAAAAAGCCGAACTCCAAATAAAGGAAATGATAAAGCACTGCTTTGCCAACCTGCTAGTAAATTCCTGCCTATGATAGAAGAGGTGTACAAGATCTTATTAGAAAAAACAAAGAGCGTCCCAGGGGCTAAGGTAGAGAACAACAAATTCTGTTTGTCCGTTCACTTTCGTTGTGTTGACGAAAAGTGTTGGGCTGCATTGGCGGAACAAGTTAGATTGGTGCTCAATGAGTACCCAAAACTGAAGCTAACCCAAGGAAGAAAAGTACTTGAGATCCGTCCAACCATTAAATGGGACAAGGGAAAAGCTCTTGAATTCTTGTTAGAATCACTTGGATATGACAATTCCAATGACGTTTTCCCAATTTATATTGGCGATGATCGTACAGACGAGGATGCTTTTAAGGTTTTGCGCAACAGAGGTCAAGGGATTGGAATTCTTGTTTCTAGAGTTCCAAAAGACACAGAAGCTTCGTACACTTTGAAGGATCCAGTAGAGGTTGAGCAATTTTTGCGGCGTCTAGTGGAATGGAAAAGATCGAGTACACAGTGA 1053 0.4217 MKNHENNVVGPDVMLIALAASIPNAAVFGGFLNLSSSQIKDTNNWIDSIRASSPTRTRSSSSSDNQDKINSWMLYHPSALNMFDQIAYNMKGKKIVTFLDYDGTLSPIVADPDKAFMTKKMRATLKDIARHFPTAIVTGRCRDKVYSFVKLAQLYYAGSHGMDIKGPTKSRTPNKGNDKALLCQPASKFLPMIEEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKCWAALAEQVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYDNSNDVFPIYIGDDRTDEDAFKVLRNRGQGIGILVSRVPKDTEASYTLKDPVEVEQFLRRLVEWKRSSTQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00909 350 FunFam Trehalose 6-phosphate phosphatase 192 350 - -
Arst8g00909 350 NCBIfam trehalose-phosphatase 92 342 IPR003337 GO:0003824|GO:0005992
Arst8g00909 350 Gene3D - 95 193 IPR023214 -
Arst8g00909 350 Gene3D - 201 350 IPR023214 -
Arst8g00909 350 NCBIfam HAD-IIB family hydrolase 98 306 IPR006379 -
Arst8g00909 350 Pfam Trehalose-phosphatase 98 331 IPR003337 GO:0003824|GO:0005992
Arst8g00909 350 SUPERFAMILY HAD-like 98 344 IPR036412 -
Arst8g00909 350 CDD HAD_TPP 98 334 - -
Arst8g00909 350 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 349 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00909 Arst-Chr8 12503634 12505761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00909 91 341 Trehalose Biosynthesis Gene Families AT1G70290 26.296 2.61e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00909 K01087 - gmx:100788641 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00909 8 12503634 12505761 Arst8g00909 8 12503634 12505761 ECH
Arst7g02355 7 55798274 55802187 Arst8g00909 8 12503634 12505761 PCT