Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00908 ATGGCAGCAATGATGGATTTCTACAGCAACACACAGCTTCAGTACTCAGATCCCTTTAGAGGTAGTGAGTTAATGGAAGTTCTTGAACCTTTTATTAAGAGTTCTTCCACAACACCCTCACCTTCACCTTCAACTTCTCCTTCTCCTCCTTCTTCAACTTCATCTCCTTCTACCTCTTACCCTTCTTCTTTCTACTTCCAATCTTCTTCTCCTTCTCCTTGTCTCCCTCCCCAACAACCCTGTTTCTTGTCCAACGGTTTACCCATGACCCAAAACTTGTTGGGATTCGGGACACAACCAACTTCAACTACTTCAACAACTTCTCTTCTTGGACTGAACCACCTAACCCCGTCACAGATCAATCAGATCCAGGCCCAAATACAGATCCAGGCCCAACCATGGCAAACACAGCACCTCAACTCCTGTGTTAGCTTCCTTGGGCCGAAGCCCATCCCGATGAAGCACGTGGGGTCAACAGCTTCAAAGCCCACGAAGCTTTACAGAGGGGTGAGGCAGAGGCACTGGGGAAAGTGGGTGGCTGAGATCAGACTCCCCAAGAACCGTACAAGGCTCTGGCTCGGAACCTTCGACACCGCAGAAGAGGCTGCTTTGGCTTACGACAAAGCCGCTTACAAGCTCCGCGGCGACTTTGCCAGACTCAACTTCCCTAACCTCCGTCACAACGGCTCCTCCGTCGGCGGTGACTTCGGCGAGTACAAGCCGCTTCACTCCTCTGTCGACGCAAAGCTTCAGGCCATATGCGAAGGCCTCGCGGAGATGCAGAAGCAGGGAAAGACGGAGAAGACGAAGCGGTCCAAAGCAGGCGCTGCTGGTTCCAAAGCTGCGGTTTCTAAGCCGGCGGCGGAGGACGTGAAGGCTTGTTGCAAGGTGGAAGAAGAAGCCGCAGCGTCGCCGCCCGAGAGCGATGGTGGTTCGTCGGAGGATTCTTCGCCGCTGTCAGATCTGACGTTTGGTGATGTTGATGACGTTGGTGATAATTTTAATCTTCAGAAGTTCCCTTCGTATGAGATTGATTGGGATTCTCTGTGA 1050 0.521 MAAMMDFYSNTQLQYSDPFRGSELMEVLEPFIKSSSTTPSPSPSTSPSPPSSTSSPSTSYPSSFYFQSSSPSPCLPPQQPCFLSNGLPMTQNLLGFGTQPTSTTSTTSLLGLNHLTPSQINQIQAQIQIQAQPWQTQHLNSCVSFLGPKPIPMKHVGSTASKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSSVGGDFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKTKRSKAGAAGSKAAVSKPAAEDVKACCKVEEEAAASPPESDGGSSEDSSPLSDLTFGDVDDVGDNFNLQKFPSYEIDWDSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00908 349 FunFam Ethylene-responsive transcription factor 2 165 224 - -
Arst8g00908 349 MobiDBLite consensus disorder prediction 262 326 - -
Arst8g00908 349 MobiDBLite consensus disorder prediction 30 64 - -
Arst8g00908 349 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 349 - -
Arst8g00908 349 Gene3D AP2/ERF domain 166 224 IPR036955 GO:0003700|GO:0006355
Arst8g00908 349 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Arst8g00908 349 PRINTS Ethylene responsive element binding protein signature 189 205 IPR001471 GO:0003700|GO:0006355
Arst8g00908 349 CDD AP2 165 225 IPR001471 GO:0003700|GO:0006355
Arst8g00908 349 ProSiteProfiles AP2/ERF domain profile. 166 223 IPR001471 GO:0003700|GO:0006355
Arst8g00908 349 SMART rav1_2 166 229 IPR001471 GO:0003700|GO:0006355
Arst8g00908 349 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Arst8g00908 349 Pfam AP2 domain 167 215 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00908 Arst-Chr8 12462530 12464448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00908 1 349 AP2-EREBP Transcription Factor Family AT1G78080 51.622 1.99e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst8g00908 AP2 7.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00908 K09286 - gmx:100800478 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00908 8 12462530 12464448 Arst8g00908 8 12462530 12464448 ECH
Arst7g02345 7 55475019 55476918 Arst8g00908 8 12462530 12464448 PCT