Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00881 ATGTCTTCGTCTTCTTCGGCGGCTGCCGCAAATAATTCGCCGTGTGCGGCATGCAAGATTCAGCGTAGAAAGTGCACACAGGAGTGTGTGTTCGCGCCGTACTTCCCGCCGGACAACCCGCAGAGATTTGCGTACGTTCACAAAGTGTTCGGAGCAAGCAACGTGGCAAAACTCCTCAACGACCTGAACGCAGCTCAACGAGAGGATGCAGTGAAGTCACTAGCATACGAGGCGGAGGCGCGTCTCCGTGACCCCGTGTACGGATGCGTAGGCCTCATTTCACTTCTCCAGCACAAGCTCAAACAGCTTCAGGCTGAACTTAACCATGCCAAGACGGAACTCGCAAACTACGTTGTCGTTAACAATAATAATAACGGTTCACCTCACGCGCCTGTTCTCCCGCTCTTTAACAACCAACACCATCAGCAACCGTCTCAACTGAATCGTAACAACCTCTCACATCACTCTCTGCAACCGTTTTCTGTTTCTGTTTCCCCTTTTCAGGAGGCTGTTATGCAGCACCAGCAAGAGATTTTGGGGTTTGAGAACTATATGACGATTGGTTCTTCTTCCGCTGCTTCTGCTGTCTCTCCTTCGCTGGCTCTTGGACCGGTTGATCACAGTTTTCATCACCATCATCATAATCATCACCATAATTTGCAGCAGCAGATTCAGGCGCATCATCAATCTTTTATGTTTCAGAAGCAGGCAAAGTTCGAAGGCGAGGAGGGTAGGAATAGCAGGAGGACTGGTCCTTCTTGTTGCTGA 768 0.5013 MSSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYVVVNNNNNGSPHAPVLPLFNNQHHQQPSQLNRNNLSHHSLQPFSVSVSPFQEAVMQHQQEILGFENYMTIGSSSAASAVSPSLALGPVDHSFHHHHHNHHHNLQQQIQAHHQSFMFQKQAKFEGEEGRNSRRTGPSCC 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00881 255 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Arst8g00881 255 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Arst8g00881 255 Coils Coil 93 120 - -
Arst8g00881 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00881 Arst-Chr8 12066167 12067340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00881 9 118 AS2 family AT5G66870 78.182 9.52e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst8g00881 LOB 2.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00881 - - adu:107460830 470.7