Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00861 ATGAGCAATTTGATAACCCTGTGTAGGCCTCACACACTGTTCTTCTCTTCTTTCATTACTTGCAGACACCAGTTTCAAACCAGGGCTTCTTCTTTTCGGAACCCTAATTGCAATTCCCGTTTTCCCTCTTTCTCGTTATACTCTTCCTGGCTCATCGATTCCTGGGGTTCGAGCAGGACTGGACTATGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACGAACAACAATCCCCGTATGAAACCCTTGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGCGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAGCGAAGACGGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGATCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGAGAGTTGAATCTACGTTTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCAGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCGGCAGAAGGTCTTGAATCAGATAGTGATGAATGA 816 0.4461 MSNLITLCRPHTLFFSSFITCRHQFQTRASSFRNPNCNSRFPSFSLYSSWLIDSWGSSRTGLWFRVNQRRTLAKASNWDEQQSPYETLELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRRYDMDNRVNPMKASEAWMEWLMKKRKAFDQRGDMAVAAWAEQQQRELNLRFRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDSDE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00861 271 Coils Coil 85 105 - -
Arst8g00861 271 Gene3D DnaJ domain 68 167 IPR036869 -
Arst8g00861 271 PANTHER CO-CHAPERONE PROTEIN DJLA 52 270 - -
Arst8g00861 271 ProSiteProfiles dnaJ domain profile. 83 154 IPR001623 -
Arst8g00861 271 CDD DnaJ 84 143 IPR001623 -
Arst8g00861 271 PRINTS DnaJ domain signature 172 191 IPR001623 -
Arst8g00861 271 PRINTS DnaJ domain signature 85 103 IPR001623 -
Arst8g00861 271 PRINTS DnaJ domain signature 103 118 IPR001623 -
Arst8g00861 271 PRINTS DnaJ domain signature 126 146 IPR001623 -
Arst8g00861 271 SUPERFAMILY Chaperone J-domain 35 150 IPR036869 -
Arst8g00861 271 FunFam Chaperone protein dnaJ 69 174 - -
Arst8g00861 271 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Arst8g00861 271 Pfam DnaJ domain 84 151 IPR001623 -
Arst8g00861 271 SMART dnaj_3 82 146 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00861 Arst-Chr8 11819562 11822090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00861 75 151 C2H2 Transcription Factor Family AT1G74250 37.662 4.38e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00861 - - ahf:112766429 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00861 8 11819562 11822090 Arst8g00861 8 11819562 11822090 ECH