Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00851 ATGCCTCGCCGTAGTGCTCCGTCCTCATCATTGCCGCCGAGGCCAACACCAATTCCCGCCAAATTCTGGCGCGCATGTGCTGGAATCTCTGCGAAGGCACCAGTAGTGAACTCTAGGGTTTACTACTTTCCACAGGGACACATCGATCAAGCTGCTTCGCAACCGCGAAACCTTTCACCTCTGGTTTACTCCAGGCCGGTCATCCCTTGCCGTGTCGCCGCCGTCAACTACTTCGCGGACCCTAACACCGACGAGGTCTTCCTCAAGATTCTTCTTGTTCCTGTCACCGATGGATCCGCTCAAGATTTTCTTCCACCTGCCGTCGCCGCCGAAGGCAACAGTGGCAACGGCAATGGCGACGATGAAGAGGTTGCGTCGTACGCCAAGATTCTCACGCGGTCCGATGCGAATAATGGCGGAGGGTTTTCGGTGCCGAGATCCTGTGCGGACTTGGTCTTCCCGCCGTTGAACTTTGAAGAGGACCCGCCGGTGCAGAATCTTAGAATAACCGACCTACACGGCGCCGTATGGGAGTTTCGCCACATCTACCGCGGGACTCCGAGACGGCACCTCTTCACATCCGGCTGGAGCAAGTTCGTTAACAGTAAGAAGATTATCTCCGGCGATACTGTGGTTTTCATGAAGGACTCCGATGGGAGGATGTTCGTCGGGCTCCGCCGCAATATGTCGCTGGACGACGATATCGCAGATGGTGGATTGGATTGGTTTGCAGCTATGGACGAGGGCGAAGGAGAAAAAGAAGAGGAAGAAAAAGAAGAGGTGATGACGGAGGGATTTGCAAGAAACGGGAAGGGGAGAGTGACTTCGACATCGGTGGCAGAGGCGATGGAGCTGGCAGCTCAAAACAAGCCGTTCGAAGTTGTTTACTATCCAAGCGTGGGTTGGGGGGAGTTTGTGGTGAAGGCAGAGGACGTGGACGTGATGATTAATGGTATTCCTTGGAGAGTTGGGATGAGAGTGAAAATGGGCAGAGAGAACTATGATTCGTCACGGATGGATTGGTTTCAGGGGACTGTTTCTGGTGTTACTGTTCCCGGTAAAGATCAACCATGGAGTGGTTCTCCTTGGCGCATGCTTCAGATTACATGGGATGAATCCGAAATCTTGAAGAATGTAAATCCTGTCAGTCCATGGCAGGTGGAACTTCTTTCTGAGACACTTTTACTTCCTCAAGTATTTCCCCCAACAAAGAGGTTCAGAACTAATGAAATGGGAGAATCCTCCTCTTCCATTACAAGATTTTCTATTCCTGATTCCACAATGGGAGTGCTGAATCAAACATTGTTGAGTAATTATGATACTTTTTTTTCTGCTAGCATGCAGGGAGCCAGGCATCCTCTATTTTCTGCAGCTACTTATCCCCTCTTTCCGATTGATCCTTCTCTGTCTATTGATAGTTCCTTTGAGAATAATATTGTACCAAAGTTAAATGTTATGTTGCCAAAACTTAACATTGACACTCATAAGCCTAAAAACTTATCACCACATAGCAAGTCTAGTTTGACTCCCATTGATGAGACCCCTAACAGCAACTTAACCAAATCTGGAGCTACTTCATTTCAGTTATTTGGTTGTACTATTCAAACAGATCAAGCTTCTGATAAAATTGATGACCATAACAATGTTGAAGGAGAAGACAACATACAATAA 1671 0.4829 MPRRSAPSSSLPPRPTPIPAKFWRACAGISAKAPVVNSRVYYFPQGHIDQAASQPRNLSPLVYSRPVIPCRVAAVNYFADPNTDEVFLKILLVPVTDGSAQDFLPPAVAAEGNSGNGNGDDEEVASYAKILTRSDANNGGGFSVPRSCADLVFPPLNFEEDPPVQNLRITDLHGAVWEFRHIYRGTPRRHLFTSGWSKFVNSKKIISGDTVVFMKDSDGRMFVGLRRNMSLDDDIADGGLDWFAAMDEGEGEKEEEEKEEVMTEGFARNGKGRVTSTSVAEAMELAAQNKPFEVVYYPSVGWGEFVVKAEDVDVMINGIPWRVGMRVKMGRENYDSSRMDWFQGTVSGVTVPGKDQPWSGSPWRMLQITWDESEILKNVNPVSPWQVELLSETLLLPQVFPPTKRFRTNEMGESSSSITRFSIPDSTMGVLNQTLLSNYDTFFSASMQGARHPLFSAATYPLFPIDPSLSIDSSFENNIVPKLNVMLPKLNIDTHKPKNLSPHSKSSLTPIDETPNSNLTKSGATSFQLFGCTIQTDQASDKIDDHNNVEGEDNIQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00851 556 Gene3D - 124 229 IPR015300 -
Arst8g00851 556 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 545 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst8g00851 556 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
Arst8g00851 556 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Arst8g00851 556 FunFam Auxin response factor 125 229 - -
Arst8g00851 556 SUPERFAMILY DNA-binding pseudobarrel domain 123 233 IPR015300 -
Arst8g00851 556 Pfam Auxin response factor 282 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst8g00851 556 Gene3D - 321 394 - -
Arst8g00851 556 MobiDBLite consensus disorder prediction 494 517 - -
Arst8g00851 556 CDD B3_DNA 126 227 IPR003340 GO:0003677
Arst8g00851 556 SMART B3_2 127 229 IPR003340 GO:0003677
Arst8g00851 556 MobiDBLite consensus disorder prediction 501 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00851 Arst-Chr8 11655552 11657578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00851 22 553 B3 DNA Binding Superfamily AT1G77850 42.190 2.42e-130 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst8g00851 B3 2.6e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00851 - - ahf:112730398 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00851 8 11655552 11657578 Arst8g00851 8 11655552 11657578 ECH
Arst8g00852 8 11682709 11683681 Arst8g00851 8 11655552 11657578 PCT