Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00824 ATGGAGGATTTGCAGAGTGTTCTTGTGGATCGCAACTTAACAGTTTCCAGTGTCCCAGAAAAGGGTCGTTCCCTCTTTGTAACAAAGGATTTTTACCCTGGGGAGGTAATCATAAGTCAAGAGCCTTATGTTTGTGTTCCAAACAACAACTCAGTTCAGAAAAGGTGCGAAGGATGTTTTACAACAACTAACCTTAAGAAATGCTCACGGTGCCAAGTTGTGTGGTACTGTGGAACCTCTTGTCAGAAGTTAGAGTGGAAGTTTCATCGTCTTGAATGCGAGGTCCTCTCTAGGCTAGACAATGACAAGAAAAAATTTGTCACACCATCCATTCGATTGATGGTTAAACTTTATCTTCGAAGGAAACTGCAAAATGAGAAGATCATACCAAGCACTGTTATGGACAACTACAACTTGGTGGAGGCTTTAGTGTCTCGTATCCTTTTAATATTTATCTTGTCTTCTAACTTTCAATGTAATGAAGTTAGATTTTTTTTATATATACTTTTTTTTTTCATTTATAACATTTCCATAGTCATTGTTCTCTTTAACATTCTCTTCCATGAAGACATGTCTGACATCACCAAGGAGCAACTGCTGCTGTATGCACAGATGGCTAATCTAGTAAACGTGATACTACAGTGGCCTGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGCAATGCACATACCATTTGTGACAGCGAGTTGAGACCATTGGGAACAGGATTGTATCCCGTTATTTCCATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCGTCAGTTCGAGCTGTGCAACATGTTCCCAAAGGTAGTGAGGTACTAATAAGTTACATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAAAGAGCAGTACCTATTCAATTGTACATGTCCTCGCTGTTCTAAACTGGGCCAGTATGATGATATCCGAGAAAGTGCAATTCTAGAAGGATACAGATGTAAAAATGAAAAATGTGATGGTTTCTTGCTTCGTACTACTGATGGAAAAGGATTCCAATGCCAACAATGTGGTCTGGTTAGGGAAAAGGAAGAGATAAAGAAAACTGCAACCGAGATAAATTCACTATCAGAGGAAGAAGCTTCTAAGCTTTCATCTGCCGGCTATTATCAAGAAGCTATTTCCATATATAAAATGATTGAGAAACTGCAAACAAAACTCTATCATCCTTTCTCCATCAGCTTGATGCGAACTCGAGAGAAGATTTTGAAGTCATTGATGGAGCTGGAACATTGGAGTGAGGCTTTAGCATACTGCAAATTGACCATACCAGTCTATCAAAGTGCATATCCAGCTATTCACCCTCTACTCGGTTTGCAGTACTATACATGTGGAAAACTTGAATGGTATCTGGGAGAAACAGAGGAAGCCGTGAAATCACTGACCAAGGCAGTGGATATACTAAGGATTACTCATGGGACAAACACACATTTTGTGAAGGAACTTTTGATGAAGTTGGAAGAAGCCCGCGCTGAAGCATCTTACAAATCTTCCTCTAAAGAGTAG 1578 0.3961 MEDLQSVLVDRNLTVSSVPEKGRSLFVTKDFYPGEVIISQEPYVCVPNNNSVQKRCEGCFTTTNLKKCSRCQVVWYCGTSCQKLEWKFHRLECEVLSRLDNDKKKFVTPSIRLMVKLYLRRKLQNEKIIPSTVMDNYNLVEALVSRILLIFILSSNFQCNEVRFFLYILFFFIYNISIVIVLFNILFHEDMSDITKEQLLLYAQMANLVNVILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSASVRAVQHVPKGSEVLISYIETAGSTMTRQKALKEQYLFNCTCPRCSKLGQYDDIRESAILEGYRCKNEKCDGFLLRTTDGKGFQCQQCGLVREKEEIKKTATEINSLSEEEASKLSSAGYYQEAISIYKMIEKLQTKLYHPFSISLMRTREKILKSLMELEHWSEALAYCKLTIPVYQSAYPAIHPLLGLQYYTCGKLEWYLGETEEAVKSLTKAVDILRITHGTNTHFVKELLMKLEEARAEASYKSSSKE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00824 525 Gene3D Tetratricopeptide repeat domain 296 525 IPR011990 GO:0005515
Arst8g00824 525 Gene3D - 47 95 - -
Arst8g00824 525 Coils Coil 363 383 - -
Arst8g00824 525 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Arst8g00824 525 SMART set_7 11 298 IPR001214 GO:0005515
Arst8g00824 525 Pfam SET domain 22 291 IPR001214 GO:0005515
Arst8g00824 525 Pfam MYND finger 56 93 IPR002893 -
Arst8g00824 525 SUPERFAMILY SET domain 8 291 IPR046341 -
Arst8g00824 525 SUPERFAMILY TPR-like 386 491 IPR011990 GO:0005515
Arst8g00824 525 Gene3D SET domain 208 291 IPR046341 -
Arst8g00824 525 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Arst8g00824 525 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 512 - -
Arst8g00824 525 ProSiteProfiles SET domain profile. 11 292 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00824 Arst-Chr8 11313179 11317311 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst8g00824 SET 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00824 K11426 - gmx:100789518 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00824 8 11313179 11317311 Arst8g00824 8 11313179 11317311 ECH