Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00823 ATGGAGGATTTGCAGAGTGTTCTTGTGGATCGCAACTTAACAGTTTCCAGTGTCCCAGAAAAGGGTCGTTCCCTCTTTGTAACAAAGGATTTTTACCCTGGGGAGGTAATCATAAGTCAAGAGCCTTATGTTTGTGTTCCAAACAACAACTCAGTTCAGAAAAGGTGCGAAGGATGTTTTACAACAACTAACCTTAAGAAATGCTCACGGTGCCAAGTTGTGTGGTACTGTGGAACCTCTTGTCAGAAGTTAGAGTGGAAGTTTCATCGTCTTGAATGCGAGGTCCTCTCTAGGCTAGACAATGACAAGAAAAAATTTGTCACACCATCCATTCGATTGATGGTTAAACTTTATCTTCGAAGGAAACTGCAAAATGAGAAGATCATACCAAGCACTGTTATGGACAACTACAACTTGGTGGAGGCTTTAGTGTCTCACATGTCTGACATCACCAAGGAGCAACTGCTGCTGTATGCACAGATGGCTAATCTAGTAAACGTGATACTACAGTGGCCTGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGCAATGCACATACCATTTGTGACAGCGAGTTGAGACCATTGGGAACAGGATTGTATCCCGTTATTTCCATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCGTCAGTTCGAGCTGTGCAACATGTTCCCAAAGGTAGTGAGGTACTAATAAGTTACATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAAAGAGCAGTACCTATTCAATTGTACATGTCCTCGCTGTTCTAAACTGGGCCAGTATGATGATATCCGAGAAAGTGCAATTCTAGAAGGATACAGATGTAAAAATGAAAAATGTGATGGTTTCTTGCTTCGTACTACTGATGGAAAAGGATTCCAATGCCAACAATGTGGTCTGGTTAGGGAAAAGGAAGAGATAAAGAAAACTGCAACCGAGATAAATTCACTATCAGAGGAAGAAGCTTCTAAGCTTTCATCTGCCGGCTATTATCAAGAAGCTATTTCCATATATAAAATGATTGAGAAACTGCAAACAAAACTCTATCATCCTTTCTCCATCAGCTTGATGCGAACTCGAGAGAAGATTTTGAAGTCATTGATGGAGCTGGAACATTGGAGTGAGGCTTTAGCATACTGCAAATTGACCATACCAGTCTATCAAAGTGCATATCCAGCTATTCACCCTCTACTCGGTTTGCAGTACTATACATGTGGAAAACTTGAATGGTATCTGGGAGAAACAGAGGAAGCCGTGAAATCACTGACCAAGGCAGTGGATATACTAAGGATTACTCATGGGACAAACACACATTTTGTGAAGGAACTTTTGATGAAGTTGGAAGAAGCCCGCGCTGAAGCATCTTACAAATCTTCCTCTAAAGAGTAG 1446 0.4115 MEDLQSVLVDRNLTVSSVPEKGRSLFVTKDFYPGEVIISQEPYVCVPNNNSVQKRCEGCFTTTNLKKCSRCQVVWYCGTSCQKLEWKFHRLECEVLSRLDNDKKKFVTPSIRLMVKLYLRRKLQNEKIIPSTVMDNYNLVEALVSHMSDITKEQLLLYAQMANLVNVILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSASVRAVQHVPKGSEVLISYIETAGSTMTRQKALKEQYLFNCTCPRCSKLGQYDDIRESAILEGYRCKNEKCDGFLLRTTDGKGFQCQQCGLVREKEEIKKTATEINSLSEEEASKLSSAGYYQEAISIYKMIEKLQTKLYHPFSISLMRTREKILKSLMELEHWSEALAYCKLTIPVYQSAYPAIHPLLGLQYYTCGKLEWYLGETEEAVKSLTKAVDILRITHGTNTHFVKELLMKLEEARAEASYKSSSKE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00823 481 Gene3D SET domain 24 274 IPR046341 -
Arst8g00823 481 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Arst8g00823 481 Gene3D Tetratricopeptide repeat domain 402 480 IPR011990 GO:0005515
Arst8g00823 481 Pfam MYND finger 56 93 IPR002893 -
Arst8g00823 481 Coils Coil 319 339 - -
Arst8g00823 481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 468 - -
Arst8g00823 481 Gene3D - 55 105 - -
Arst8g00823 481 Pfam SET domain 22 247 IPR001214 GO:0005515
Arst8g00823 481 Gene3D - 106 190 - -
Arst8g00823 481 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Arst8g00823 481 SUPERFAMILY SET domain 8 247 IPR046341 -
Arst8g00823 481 SMART set_7 11 254 IPR001214 GO:0005515
Arst8g00823 481 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Arst8g00823 481 SUPERFAMILY TPR-like 342 447 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00823 Arst-Chr8 11313179 11317311 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst8g00823 SET 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00823 K11426 - gmx:100789518 790.801