Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00787 ATGGTTAAGGCAGAAGAGAAGATCCAAAGAGAGACAGCAATGAAGAATAATAATAAGCAGAAGAAGTACAAGGGAGTGAGAATGAGGAGTTGGGGATCATGGGTTTCAGAGATTAGAGCACCAAATCAGAAAACAAGAATATGGTTAGGTTCATATTCAACTGCAGAAGCTGCTGCTAGAGCCTATGATGCTGCACTTCTCTGTCTTAAAGGCTCTTCTGCAAATCTCAATTTCCCATTAACTTCTTCTACTTACATTAACATCATCCCTCATAATCAAGATTCTTCTTCTTCTTCTTCATCTGCTACTATGTCTCCAAAATCAATTCAAAGAGTTGCTGCTGCTGCTGCTGCTAATTGCACCTTTGTTGATGACATCAGCAACAATGCTAATGCTACAACACCTTCATCATCTTCTTCTTCTTCTTCTTCATCATCATCATCATTGGTGTCATCACCATCAATGGTTTCATCTCCCTCTGAACAAACTACTGATGATGATGTTGTAGATGCAGCATCACTCATCATGTCTTCAACTACTACTACTACTAGCTGTGATGAATCCATGGCTATGATGGAAGAGCCTTGGTACAACACCTTTGATGATGCTCTTGATCAGATGCTGAGTGGTTTCTTTGACCTTGATTCATCTCAGCTTCTTGGTGATCTTTATGAAGAAGAAAGTGACATTCGTTTGTGGAGTTTCTGTTAG 711 0.3966 MVKAEEKIQRETAMKNNNKQKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLTSSTYINIIPHNQDSSSSSSSATMSPKSIQRVAAAAAANCTFVDDISNNANATTPSSSSSSSSSSSSSLVSSPSMVSSPSEQTTDDDVVDAASLIMSSTTTTTSCDESMAMMEEPWYNTFDDALDQMLSGFFDLDSSQLLGDLYEEESDIRLWSFC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00787 236 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Arst8g00787 236 Coils Coil 1 21 - -
Arst8g00787 236 MobiDBLite consensus disorder prediction 131 165 - -
Arst8g00787 236 Gene3D AP2/ERF domain 21 81 IPR036955 GO:0003700|GO:0006355
Arst8g00787 236 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Arst8g00787 236 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Arst8g00787 236 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Arst8g00787 236 FunFam ethylene-responsive transcription factor ERF014-like 21 81 - -
Arst8g00787 236 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 181 - -
Arst8g00787 236 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Arst8g00787 236 MobiDBLite consensus disorder prediction 1 18 - -
Arst8g00787 236 MobiDBLite consensus disorder prediction 1 23 - -
Arst8g00787 236 CDD AP2 25 79 IPR001471 GO:0003700|GO:0006355
Arst8g00787 236 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00787 Arst-Chr8 11051680 11052683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00787 23 235 AP2-EREBP Transcription Factor Family AT1G21910 45.540 1.74e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst8g00787 AP2 4.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00787 - - gmx:100813313 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00787 8 11051680 11052683 Arst8g00787 8 11051680 11052683 ECH