Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00780 ATGGGAGAAAGATTAGTGATGAGCAAGGCAAAGCCTTATTTGCTAACTGTGGGGCTTCAATTTGGATTGGCAGGAACCTACATATTCTCCATGGCCAGTCTCAACCATGGAATGAGTCGTTATGTCTTTGTTGTTTATCGCAATCTCATTGCTGCTATTTCCCTCGCTCCCTTTGCATTCTTTTTTGAAAGGAAGGTTAGGCCAAAGATGACACTCTCTGTCTTTATACGAATATTGGTTCTCGGGCTTCTAGAGCCAGTGATAGACCAAGGATTCACTTTCTTAGGGATGCAATATACTTCAGCTTCATTTGCATCTGCCATTATGAATGCTGTCCCATCCGTTACCTTTGTCCTAGCAGTCATTTTCAGAATAGAGCGCGTAAACGTGAAAGAGGTGCGAAGCCTAGCAAAGGTGATTGGGACATTGGTAACGTTTTGTGGCGCATTGGTGATGATACTCTACAAAGGCCCTATTATGAACCTTTTTGGTTCTTCACACGCAATCCATGATGATAATCATCACCACCATGATTCAACTCACTCCACTCACAGCCTCTCTCATTGGGTCTCTGGAACTCTCTTTCTTTTTCTCGGTTGTGTCGCTTGGTCATCCTTCTACGTGTTACAGTCTGTAACGTTGAAAAGTTACCCGGCCGAGATGTCATTGTCGTCCTTGATATGCTTGGCGGGTGCTTCGCAAGCTTCTGTCGTGGCTGCGGTGGCTGAGCATCACTCCGGCGCTCGCCCTTGGATCGTTGGTTGGGACTTTAGGCTTTATGGTCCTCTTTACTCGGGTATAGTTAGCTCAGCGATTGCGTATTACGCGCAAGGGTTGGTGTTACAAAGCAAAGGCCCAGTGTTTTTAACGGCATTTAATCCCCTTTGCATGATCATTGTTTCCGTCTTGGGCTATTTTCTTCTCTCTGAGACTCTTCACCTGGGCAGTATCATAGGAGCAATTATTATAGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGACAGTTCTGACCCTACTATGACGCCGACCACAACAACAACTAAGCAAACAGAGTTGCAACAAAAACAACTCCCAATTACATCATCCGATATCTAA 1104 0.452 MGERLVMSKAKPYLLTVGLQFGLAGTYIFSMASLNHGMSRYVFVVYRNLIAAISLAPFAFFFERKVRPKMTLSVFIRILVLGLLEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVIFRIERVNVKEVRSLAKVIGTLVTFCGALVMILYKGPIMNLFGSSHAIHDDNHHHHDSTHSTHSLSHWVSGTLFLFLGCVAWSSFYVLQSVTLKSYPAEMSLSSLICLAGASQASVVAAVAEHHSGARPWIVGWDFRLYGPLYSGIVSSAIAYYAQGLVLQSKGPVFLTAFNPLCMIIVSVLGYFLLSETLHLGSIIGAIIIAVGLYSVVWGKGKDSSDPTMTPTTTTTKQTELQQKQLPITSSDI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00780 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 156 - -
Arst8g00780 367 MobiDBLite consensus disorder prediction 339 367 - -
Arst8g00780 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 336 - -
Arst8g00780 367 MobiDBLite consensus disorder prediction 336 367 - -
Arst8g00780 367 Pfam EamA-like transporter family 191 331 IPR000620 GO:0016020
Arst8g00780 367 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020
Arst8g00780 367 PANTHER WAT1-RELATED PROTEIN 11 344 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00780 Arst-Chr8 10982001 10987659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00780 3 337 Nodulin-like Gene Family AT2G37460 48.955 3.21e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00780 - - gmx:100812537 484.182