Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00757 ATGGAAGGTGATGATGGAAAACAACCAACCCACAAAGAACCATGCAATAATAATAGTAGTAACAATAATGAATTATTTGAGCAAGAGAACTTTGATTATATTCTTGCAATTAGCTTGCAAGAACAAGAGGGAGCAACATACACAACCCTAGCAACCATGGAAAGTGACGACGATGAAGAAGACGACGACGAAGATGATTATTCCTCTTTGGGCGATGAAGATGGCGATTCTGAGTATTATTTAGAAAGCCAAGACTTTGAGGAGTCAGAAAGTCAGTTCCTTGAAGGTGAAGGAAGCAACTACGACGACGATGACGAGGGAGAAGAAGAAGAGATGGAAGAAGATGAAATTGATCCAGATGAAATGTCCTATGAAGAGTTGATTGAGTTGGGAGAAATCATAGGAGAAGAGAATAGAGGATTATCAGAAAATGAAGTGTCTTCTTGCTTATACCCTTACACTTGCAAATCTAATAGTGATGATGAAAGAATCGATCGGTGTGTAGTTTGTCAGATAGAATATGAAGAAGGTGAATCAATGGTGGCACTGGAATGTAAGCACCCTTTTCATGAAGATTGCATAACCACATGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTGGCAATGAAGTTTCAACCAATAATAATAATACCAACAAGATCATGCCTAAGAATGAATAA 681 0.3803 MEGDDGKQPTHKEPCNNNSSNNNELFEQENFDYILAISLQEQEGATYTTLATMESDDDEEDDDEDDYSSLGDEDGDSEYYLESQDFEESESQFLEGEGSNYDDDDEGEEEEMEEDEIDPDEMSYEELIELGEIIGEENRGLSENEVSSCLYPYTCKSNSDDERIDRCVVCQIEYEEGESMVALECKHPFHEDCITTWLQIKKVCPICGNEVSTNNNNTNKIMPKNE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00757 226 MobiDBLite consensus disorder prediction 1 26 - -
Arst8g00757 226 MobiDBLite consensus disorder prediction 53 122 - -
Arst8g00757 226 SUPERFAMILY RING/U-box 166 214 - -
Arst8g00757 226 MobiDBLite consensus disorder prediction 46 122 - -
Arst8g00757 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 224 IPR013083 -
Arst8g00757 226 Pfam Ring finger domain 166 207 IPR001841 -
Arst8g00757 226 SMART ring_2 167 207 IPR001841 -
Arst8g00757 226 MobiDBLite consensus disorder prediction 12 26 - -
Arst8g00757 226 ProSiteProfiles Zinc finger RING-type profile. 167 207 IPR001841 -
Arst8g00757 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 22 212 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00757 Arst-Chr8 10710320 10711198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00757 114 211 C3H Transcription Factor Family AT3G63530 48.000 6.16e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00757 K19045 - gmx:100526881 190.274