Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00729 ATGGCAAGCGTTCTTAGACAGCAGCAACAGCCAGCAGGGAGTGGTGGTAACAACCGCGTGGTTGCCGTAAGTGCCACACCTCCCAATAATATCCTCCATACTCATGCTGATGCCTCCTCAAATCACGAGAAAAAAGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTAGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATATGAGCTACTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCGGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGGTACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTAAAACCACCAGCGTCTGGTGTCATAAAGGGCATGTTTATTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGCAAACACTGATCATTGCACCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGATTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGCGCCGGTCGACTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGATTGGCTAATTCATAATAGTTTGCCAAAGGTGGGAAATGTGTTCATTGGGATCATAGTGTTTCCTCTGATGGCAATCTATGTCGGCTCAGTTATATACCTAACATTCAGAAAAGACACTGTTCAGACATATATTGAGACCAAGGATAACACAGCAATGCAAACCCATGTGGAAAAGGGGTTCATGAATTCTAATGGTGAGTTAGAGTTGAGCCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCGGAATAA 1638 0.4487 MASVLRQQQQPAGSGGNNRVVAVSATPPNNILHTHADASSNHEKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFIPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSANTDHCTDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWIRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVDWLIHNSLPKVGNVFIGIIVFPLMAIYVGSVIYLTFRKDTVQTYIETKDNTAMQTHVEKGFMNSNGELELSHGPIREDLADIPLPE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00729 545 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 402 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 MobiDBLite consensus disorder prediction 1 20 - -
Arst8g00729 545 Hamap Divalent metal cation transporter MntH [mntH]. 36 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 NCBIfam Nramp family divalent metal transporter 55 421 - -
Arst8g00729 545 Pfam Natural resistance-associated macrophage protein 71 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Arst8g00729 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 38 504 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00729 Arst-Chr8 10166106 10171739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00729 14 545 Inorganic Solute Cotransporters AT1G15960 58.209 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00729 K21398 - gmx:100787785 892.493