Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00725 ATGTCGAACCGTCGTTCATCGTTTTCTTCCTCAACGACGTCGTCTTTGGCAAAACGCCTCTCTGGTATTTTTTCCACTTCTGTACCTTGTGCTACTAAAGTTGCTAAGACGAAGAAAGAGGCTTCATCATGTAACACTACTACAACTTGTTCTTCAATTTCAAGCAACAAGATACCGATTTTGCAGAGTGCTGTAAAGTGCAATGCTGTTGTTTTTCCGAAGCCTAGTTATGTCTCTGCAAGGGAAGAAGGTGATGCTAAGAAAGTTGTTGTTGCTGTTGCTGCTGCTGCCCCTGTTAGTGTTCATATCTCAAAAATGGATATTTCTCCTTGTAAATCAGATGGGGCATCTGTTTCCATGTCTGTGGATGAGACCATGTCTTCTTGTGAATCTTTCAAGAGCCCTGACATTGAGTATTTGGACAACAATGATATCGCGCCGGCCGTTGACTCAATTCAGAGGAAGACATTCAGCACCCTCAACATTTCTGATACTCCAGAGCCACCAGCAGGGAACATATGCAGTAGAGACATACTTGTTGAGTTGGAGAAAGATGACAAAGTTGTGAATGTTGATAACAACTTCATGGATCCCCAGCTTTGTGCAACATTTGCTTGTGATATATACAAGCACCTGCGTGCATCTGAGGCAAAGAAAAGACCTTCCACGGACTTCATGGAGAGTGTTCAGAAGGACATAAATCCAAGCATGCGTGCTATATTGATTGATTGGCTTGTTGAGGTAGCCGAAGAGTATCGATTGGTACCTGATACATTGTATTTGACAGTGAACTACATAGATAGGTATCTTTCAGGGAATCCAATGAACAGGCAAAAATTACAATTACTTGGTGTTGCTTCCATGATGGTTGCCTCTAAATATGAGGAGATTTGTGCACCCCAGGTAGAGGAATTTTGTTACATCACCGACAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTGAAGTTTGAAATGACAGCTCCAACAATTAAGTGTTTCTTAAGACGGTTCGTTCGTGCAGCTCAAGGAGTCAGTGAGACCCCTTCGTTGCAACTAGAGTGCTTGACAAACTACATTGCCGAATTGTCTTTGTTGGAGTACAGTATGCTTTGTTATGCTCCGTCACTAATAGCTGCTTCTGCAATTTTTCTAGCCAAGTTTATACTCTCCCCCTCAACCAAACCATGGAATGCTACATTGAAGCACTATACACAATACCAGCCTTCTGATTTGTGTAGTTGTGTAAGGGATCTCCATCGACTTTGTTGCAACAATCCTAACTCCAATTTGCCTGCAATTAGGGAAAAGTATAGTCAGCACAAGTACAAAAATGTGGCCAAGAAGTGTTGCCCTTCCTCAATACCTTCAGAATATTTTCAGAATTGA 1410 0.417 MSNRRSSFSSSTTSSLAKRLSGIFSTSVPCATKVAKTKKEASSCNTTTTCSSISSNKIPILQSAVKCNAVVFPKPSYVSAREEGDAKKVVVAVAAAAPVSVHISKMDISPCKSDGASVSMSVDETMSSCESFKSPDIEYLDNNDIAPAVDSIQRKTFSTLNISDTPEPPAGNICSRDILVELEKDDKVVNVDNNFMDPQLCATFACDIYKHLRASEAKKRPSTDFMESVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQKLQLLGVASMMVASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVSETPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILSPSTKPWNATLKHYTQYQPSDLCSCVRDLHRLCCNNPNSNLPAIREKYSQHKYKNVAKKCCPSSIPSEYFQN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00725 469 CDD CYCLIN_AtCycA-like_rpt2 336 450 - -
Arst8g00725 469 Pfam Cyclin, C-terminal domain 336 457 IPR004367 -
Arst8g00725 469 Gene3D - 207 455 - -
Arst8g00725 469 ProSitePatterns Cyclins signature. 238 269 IPR006671 -
Arst8g00725 469 FunFam Cyclin A1 323 455 - -
Arst8g00725 469 SUPERFAMILY Cyclin-like 336 461 IPR036915 -
Arst8g00725 469 SUPERFAMILY Cyclin-like 197 333 IPR036915 -
Arst8g00725 469 SMART Cyclin_C_2 336 459 IPR004367 -
Arst8g00725 469 Gene3D - 221 334 - -
Arst8g00725 469 Pfam Cyclin, N-terminal domain 207 333 IPR006671 -
Arst8g00725 469 PIRSF Cyclin_A_B_D_E 8 467 IPR046965 GO:0016538|GO:0044772
Arst8g00725 469 FunFam Mitotic cyclin 6 221 321 - -
Arst8g00725 469 CDD CYCLIN_AtCycA_like_rpt1 197 332 - -
Arst8g00725 469 SMART cyclin_7 340 428 IPR013763 -
Arst8g00725 469 SMART cyclin_7 243 327 IPR013763 -
Arst8g00725 469 PANTHER CYCLINS 154 451 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00725 Arst-Chr8 10093529 10096785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00725 1 469 Core Cell Cycle Gene Families AT1G44110 58.599 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00725 K06627 - gmx:547781 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00725 8 10093529 10096785 Arst8g00725 8 10093529 10096785 ECH