Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00699 ATGTTGGAAGGTGAACCGAAAGAAAATGCCACTTCAGTTGTGCCAATCAGTACGGAGACAAGCATTTTGGCTGTTGAAAATGTTCAGGGAGAAAAAATTAATTTACAGGACGTTGGGGAAAATCATCAGAAGAGAGTTTGTGTGCAAAGATCTCCAGATTGTGTCATTCCTAAAACTTCAAAGGACCAGTCCTCCTTTTTTCCCCGATCAAAGCCATTTACTTCTTCATCCCGTTCATTAAAACCTCGAACCTGGCTTCGAACAGGTAATAATTATCCTGGTTCTTTTTCTGGAAGCAAGCCTTCGTTGATAACTAGTCCTCCTAACAAGTTAATTCCACAAATGAAAGGGAACACTCAAAATACTCTTTATACCCGTAAGGGTAACAGTCTTGTTCGGAAAGTTATCCCTGTTTCTGCTTCAACATCAACATCCGTTGCTAACCAGTCACCATCTTTGGGCTTTGACAACTTTGGAAAGAGCATCAGATCTGAATGCATGGTTAATGTTCCAGGTCAACCAGGTGCTTTGAAAACTGGAGTAAATGATGTTCCTTTGAAGGGTCACATAATACTTCCACTACCCACTGACACCAAATTGGAGAGTGGATCTTCCCCATTTACAGAGAATCTTACACTTGGTTGCTCTGAATTTGCAGCTGATCCTAAGAATGTTGGAGAAACTAATGATGCCGCAAAATCTTATGAGGAATTGTGCAAATATTCTGAAACATACGAAAATCAAATTGGTTCAGACAATCGTGGGGCTGGCCAAGTTGAGATTTCTTCTTCAATTGCAAAGAGAATAGTATATATGAAGCCCAAGTCAAATAAATTAGTTGCATCTTTGGATTCTAGTAATCTCTCTGTCTCTACTGATGGCAAGACTCAAACAGCATACTCCAATGGCTACTACAAGAAGAGCAAAAATCAGATAATAAGGACTTCATTTGTTAGTCATATCAGCCCAACAGTTACAATGCAAGATAGTAATGTAAATTCTGATGGTCCATCGGATTCTAAAGAGATTTGCAGCAGGTTTACAAAGAAGTGGTCGCAAAAAGTTGCTGGGACCTTGTGCAAACCTTTAAAAGCCCCACTTGTTGGGACCCTTTCATCAAAAAACAACACTGGCTCAGGGCATTATCGGAAGATTTTGCCTCACTTTTTTCAATGGAAAAGATCAACATTTCGAAGAAGATTTGTTCACAATCGTGATTTAAGCTCCAATTCTACTCCCTCATCAGCAAACAGCAAGAAATTGCTTCTTTTAAGGAAGAGGGATGCTGTTTACACTAGATCAACCCATGGGTTTTCTCATTGGAAACCTAAGGTATTACATGCTGGTGGATCCATAAAAGGGTCCAAATTTGCTGGCAGGCACTCTGAGAAGGTTAATGAGGAAGCACTTGCTGTTGCTGTGTTGGAGAGGAAAACAAGAGAACAGAAAGATGTTGCTTGTAACAGTTCTCAGGCAAAAGGCTTGGCTGCCAAAGAAGGTTCCATCCAACGAAGATTAGTGATTGGGGAAAATGTGTATTTCCAAATTGGCAAAGGTAATCAGCTTATTAGGGACCCAAAGAATCGGACTCGGATTTTGGCTAATGAAAAAGTTAGATGGAGTCTGCACACTGCTAGACAGCGCCTTGCACGAAAGCAGAAGTACTGTCAGTTTTTTACCAGATTTGGGAAATGTAACAAGGATGATGGGAAGTGTCCTTATATTCATGATCCCTCAAAAGTTGTTGTCTGCACTAAGTTTCTAAATGGTTTATGTTCTAATGGCAACTGCAAATTGACTCATAAGGTTATTCCGGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAGTTGTCCTTACAGACATGTCAATGTGAATCCTAAGGCTTCTATTTGTGGAGAATTTCTCAGGGGCTATTGTGCCGATGGAAATGAGTGTCGGAAGAAGCATAGCTATGTCTGTCCAACCTTCGAAGCAATGGGAAACTGCGAAGAAGGAACCAAATGCAAGCTTCATCACCCGAAGAAACTGAGTAAGGAAAAGAAAAGGAAGAGGTCCAGAGATGAGAATGTTGGTAGACGGCGTTACTTTGGTTCCGTTCTCACTGATATCAAAGAAACTGGGTTAATGGTGGCTCAAAGGCAATGGCAACAGAGTCATGACAAAGACGGAGATGTTGCTGACTATATCGGCTTCGAAGTTGAAGAAAGTGTTGATCAACCATATGAACAGGCAACACCATGTAACAATGATATTTGGGACTTGCAATTGGACAATCTTGATGAACCTATTAGACCTGTTCTTACGTTGAAAAACATTTTTATGGCTCAATCATCTTCAGTCTAG 2364 0.4044 MLEGEPKENATSVVPISTETSILAVENVQGEKINLQDVGENHQKRVCVQRSPDCVIPKTSKDQSSFFPRSKPFTSSSRSLKPRTWLRTGNNYPGSFSGSKPSLITSPPNKLIPQMKGNTQNTLYTRKGNSLVRKVIPVSASTSTSVANQSPSLGFDNFGKSIRSECMVNVPGQPGALKTGVNDVPLKGHIILPLPTDTKLESGSSPFTENLTLGCSEFAADPKNVGETNDAAKSYEELCKYSETYENQIGSDNRGAGQVEISSSIAKRIVYMKPKSNKLVASLDSSNLSVSTDGKTQTAYSNGYYKKSKNQIIRTSFVSHISPTVTMQDSNVNSDGPSDSKEICSRFTKKWSQKVAGTLCKPLKAPLVGTLSSKNNTGSGHYRKILPHFFQWKRSTFRRRFVHNRDLSSNSTPSSANSKKLLLLRKRDAVYTRSTHGFSHWKPKVLHAGGSIKGSKFAGRHSEKVNEEALAVAVLERKTREQKDVACNSSQAKGLAAKEGSIQRRLVIGENVYFQIGKGNQLIRDPKNRTRILANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDDGKCPYIHDPSKVVVCTKFLNGLCSNGNCKLTHKVIPERMPDCSYFLQGLCTNRSCPYRHVNVNPKASICGEFLRGYCADGNECRKKHSYVCPTFEAMGNCEEGTKCKLHHPKKLSKEKKRKRSRDENVGRRRYFGSVLTDIKETGLMVAQRQWQQSHDKDGDVADYIGFEVEESVDQPYEQATPCNNDIWDLQLDNLDEPIRPVLTLKNIFMAQSSSV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00699 787 ProSiteProfiles Zinc finger C3H1-type profile. 550 579 IPR000571 GO:0046872
Arst8g00699 787 MobiDBLite consensus disorder prediction 59 80 - -
Arst8g00699 787 ProSiteProfiles Zinc finger C3H1-type profile. 605 631 IPR000571 GO:0046872
Arst8g00699 787 Gene3D - 632 695 - -
Arst8g00699 787 Gene3D - 578 631 - -
Arst8g00699 787 PANTHER CCCH ZINGC FINGER 28 776 - -
Arst8g00699 787 FunFam Zinc finger CCCH domain-containing protein 7 633 694 - -
Arst8g00699 787 ProSiteProfiles Zinc finger C3H1-type profile. 632 659 IPR000571 GO:0046872
Arst8g00699 787 SMART c3hfinal6 659 681 IPR000571 GO:0046872
Arst8g00699 787 SMART c3hfinal6 632 658 IPR000571 GO:0046872
Arst8g00699 787 SMART c3hfinal6 605 630 IPR000571 GO:0046872
Arst8g00699 787 SMART c3hfinal6 550 578 IPR000571 GO:0046872
Arst8g00699 787 SMART c3hfinal6 579 603 IPR000571 GO:0046872
Arst8g00699 787 FunFam zinc finger CCCH domain-containing protein 3 580 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00699 Arst-Chr8 9844495 9849142 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst8g00699 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00699 - - adu:107460707 1576.99