Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00685 ATGGCTGTGCACTCATCAAAGCAGCAGCATTCTCTTCTGCTGTTACTTCTACTAGTACTTGTTGTAGGGATCCTTTTGGAAGAAGCTAATGCAGAAGAATGCAAAAGAAAATGTGGGTCCCTTAGTATTCCGTTCCCTTTCGGCACCACGGAGGATTGTTCGCTGGACGCTTCTTTTCTGATTGATTGCAAGAGCAAGAAGAACACTCCATACTTGCCGCAAACTAACTTAACTGTGCAGAGCATCTCCCTCAACGGCCAACTCCGCGTTTCTTTTCCGGTAGCCAGTTTTTGTTACACCCGCAACGGTACCAACCAAACTAATCAGCAACACAACCTCACATATTTCACCGTTTCACCCACTCAAAACAAGCTCTTTGTTGTTGGTTGTAATACAATTGGAGCAGTGAATGCATATGATTCAGAGGGCAAGAAGTACTTCACAGGGTGCTTGGCATTGTGCAACACGCCCGACTATGCAACCAACGGGACGTGCACGGGAGTCGGTTGTTGCGAGATCCCGATCATGGCGGCGCAAGAGCTATCTAGCATGTTTTATGTTTCTCTCCGTGCCTTCACTAGCAACAGCTATGTCAGCAGTTTCAACCCCTGCAGTTATTCTTTTGTGGCGGAAGACGGAGCCTACAAGTTCTCCTCCGCGGATCTTGCCAAGTTCCACCATGCCACGTTTCCAACGGTGCTGGATTGGAGTGTGGGAAACCTGACTTGCCAACAAGCCAAGAAGAACAAGAATCATGATTTTGCGTGTAAGGCTGAGAATAGTGAATGTGTCAATGCAAAGGAACATGGTTATCTATGCAATTGCTCTGCTGGTTTTAATGGAAATCCTTATGTCCTTAATGGTTGCCAAGATGTCAATGAATGCATGGAATCCAACGATTGCTACAGTAAAGCAATTTGCCACAACGTTCCTGGTAGCTATAGCTGCTCCTGTCCAAAAGGTTACATAGGAGATGGCAAAAAATATGGAACACAATGCCGACCCAATTCCAGTTCCAATTCTAGAGCAAAGAACATTTTGATAATTGCATTGAGTATTAGTGGAGGCGTGATAGCACTACTTGTGGTGAGTTTTTATGTGTATTGGAGAATGAAGGAAAAGAAACTAATCAAACTTAAAGAACATTATTTCCAGCAAAATGGTGGCCTATTGTTACAACAACTCATTGCTAGACAAAGAGAATCAACTGATGAAACAGCTAAAGTTTTCACTGTGGATGAACTCAACAAGGCCACTAACAACTTTGATGAAAACAAGATCCTTGGTAAAGGGGGTCAAGGAACTGTTTATGAAGGACTACTATCAGATAACAAGACTGTAGCAATTAAAAGGTCCAAGATCAGTGACCCAAGTCAAATTGAACAGTTCATCAATGAGGTGGTTGTGCTCTCCCAAATCAACCACAAGAATGTGGTTAAACTTTTGGGCTGCTGTTTAGATGCACAAGTTCCATTGCTTGTTTATGAGTTCATTCCCAATGCAAAGGTTTCGGATTTCGGAGCTTCCAGAATTGTTCCACTTGATAAGACACAATTAACCACATTGGTGCAGGGGACATTAGGGTATCTTGATCCTGAATACTTCCAAACAAGTCAACTAACCGAGAAAAGTGATGTGTATAGTTTCGGAGTTGTTCTGGTAGAGTTACTAACAGGACGAAAGGCGCTCTCTTTCGAAATGCCGGAGAATGATAGAAACCTTGCATTGTACTTCATTTCTGCAATGAAAGGAGGGAATTTACTTGACATTGTGGACAACCATGTAATGAATGAGGCAAGGGTTGAGCAAATAATTGAATTTGCTAGTGTTGCAAAACGTTGTTTAAGAGTGATGGGTGAGAGAAGGCCTACAATGAAAGAAGTAGCAATGGAGCTTGAGGGACTTAGAGTTGAGGAGAAGCATAGAGGAGAAAGTGTGAAGTTGTATTCAGAAGAGACAGAGGAGTTGCTTAAATCAACAGTATCTACTTGCATTGTTGAAGATGTTAATAGTAGCATTGGTCAGATTTCAATGTCATTGGGTGGTGGAAGATGA 2055 0.4258 MAVHSSKQQHSLLLLLLLVLVVGILLEEANAEECKRKCGSLSIPFPFGTTEDCSLDASFLIDCKSKKNTPYLPQTNLTVQSISLNGQLRVSFPVASFCYTRNGTNQTNQQHNLTYFTVSPTQNKLFVVGCNTIGAVNAYDSEGKKYFTGCLALCNTPDYATNGTCTGVGCCEIPIMAAQELSSMFYVSLRAFTSNSYVSSFNPCSYSFVAEDGAYKFSSADLAKFHHATFPTVLDWSVGNLTCQQAKKNKNHDFACKAENSECVNAKEHGYLCNCSAGFNGNPYVLNGCQDVNECMESNDCYSKAICHNVPGSYSCSCPKGYIGDGKKYGTQCRPNSSSNSRAKNILIIALSISGGVIALLVVSFYVYWRMKEKKLIKLKEHYFQQNGGLLLQQLIARQRESTDETAKVFTVDELNKATNNFDENKILGKGGQGTVYEGLLSDNKTVAIKRSKISDPSQIEQFINEVVVLSQINHKNVVKLLGCCLDAQVPLLVYEFIPNAKVSDFGASRIVPLDKTQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLVELLTGRKALSFEMPENDRNLALYFISAMKGGNLLDIVDNHVMNEARVEQIIEFASVAKRCLRVMGERRPTMKEVAMELEGLRVEEKHRGESVKLYSEETEELLKSTVSTCIVEDVNSSIGQISMSLGGGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00685 684 SUPERFAMILY EGF/Laminin 290 328 - -
Arst8g00685 684 SUPERFAMILY Protein kinase-like (PK-like) 408 640 IPR011009 -
Arst8g00685 684 Gene3D Laminin 295 335 - -
Arst8g00685 684 Pfam Calcium-binding EGF domain 291 333 IPR001881 GO:0005509
Arst8g00685 684 Gene3D Phosphorylase Kinase; domain 1 393 497 - -
Arst8g00685 684 SMART egf_5 294 334 IPR000742 -
Arst8g00685 684 SMART egf_5 242 290 IPR000742 -
Arst8g00685 684 Gene3D Laminin 242 294 - -
Arst8g00685 684 Gene3D Transferase(Phosphotransferase) domain 1 499 663 - -
Arst8g00685 684 Pfam Protein kinase domain 501 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00685 684 ProSiteProfiles EGF-like domain profile. 291 334 IPR000742 -
Arst8g00685 684 SMART egfca_6 291 334 IPR001881 GO:0005509
Arst8g00685 684 FunFam Fibrillin 2 286 330 - -
Arst8g00685 684 Pfam Wall-associated receptor kinase galacturonan-binding 34 89 IPR025287 GO:0030247
Arst8g00685 684 ProSiteProfiles Protein kinase domain profile. 314 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00685 684 CDD EGF_CA 291 325 - -
Arst8g00685 684 ProSitePatterns Calcium-binding EGF-like domain signature. 291 316 IPR018097 GO:0005509
Arst8g00685 684 Pfam Protein tyrosine and serine/threonine kinase 425 500 IPR001245 GO:0004672|GO:0006468
Arst8g00685 684 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 500 IPR045274 GO:0007166
Arst8g00685 684 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Arst8g00685 684 FunFam Wall-associated receptor kinase 2 391 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00685 Arst-Chr8 9629552 9632988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00685 31 678 Receptor kinase-like Gene Family AT1G21250 37.778 3.88e-139 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst8g00685 Pkinase 2.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00685 - - aip:107607783 997.653