Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00682 ATGGGTTCACAGCTACATCTTCTGCTGCATCCTGTTCTTGTTCTTGTTTGGATTCTTTGTGGTGCAGCAGATGCAGTAACTCAACCAAACTCAAATTGCACAAAGCGCTGTGGCTCCCTCGAAATTCCGTTCCCATTTGGCACCGACGAGAGCTGTTCCCTCGACAGCTCCTTCCTCATCTCTTGCAACCACACTTCAACCCCATACCTGACTCACAACAACTCAACCGTGCTGAGCATCTCGCCCGACGGCGAAATGCGCGTCTCAGCAGCAGTAGCTAGAGGCTGCTACGAAGTCAACGGCACGCGAATCAACGAAACCAGTTACGATAAGATCTTCAACTTGACACACTTCAGCTTCTCATCGAGTAAAAACAAGCTCACAGTGGTTGGTTGCAACACAATTGGAGAAGTAGTAGGGTATAATGTTATAGAGAGAAGAAACTATGCCACTGGGTGCTTTTCAGTGTGCCTCAGTGTTAATGAAACAACTAGCGGGATCTGCACCGGCGCCGGTTGTTGCCAGAGCCCAATACCGGCGAGTGGCCTATCGGATATCGGTATTGGATCTTATAGTAGTGGTGCTGACAGCTACAACGCCGTTTTTGGCAACATCAACCCCTGCGGCTACGCGTTTGTGGCGGAGGATGGAGTCTACAATTTCTCCTCCGCAGACCTTGTCAACTTCCGCCACCAAAGTTTTCCCGTTGTAGTGGATTGGGCTGTGGGGAATCAGACTTGTGAAGAAGCTCAAAAGAACACTTCAAGCTATGCATGTAGGGCTGATAAAAGTGAATGTTACAATTCAACCAAGGGACTTGGTTATGTTTGCAAATGCTCCACTGGTTTTGGGGGAAATCCTTATCTCGTTGGTGGTTGCCAAGACGTTGATGAATGCATGAACAAGGAATGGAACGATTGCTATAGTAGAGCAATATGCAAGAACGTAGCTGGTAACTATACCTGTTCGTGTCCAAAAGGATACCATGGAGATGGGAGAGAAAATGGAACAAAGTGCCGTCGTCAGTCCAGGACACAATTCATTTTAATCATTGCATTGGGCGTTAGTGTTGGTGTTATAGCACTACTTGTGACAAGCTTCTATGTGTATTGGAGAATGAAGGAAAAGAGGTTAAATAAACTTAAGGAACAGTTCTTTCAACAAAATGGTGGCTTCATCCTACTACAAAAGATTTCAAGACATAGAGGGTCAAAAGAAACAGCTAAACTCTTCACCGTGGAAGAATTAAAGACAGCCACCAACAACTTTGACGAAAGCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAAAGGATTACTATCAGACAATAGAACCGTAGCAATTAAAAGATCCAAAATCAGTGGCTCAACCCAAATTGAACAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAACGTGGTTAGACTCTTAGGTTGTTGCTTAGAGACAGAAGTTCCCTTACTTGTTTATGAGTTCATTCCTAATGGTACCATTTTTGAGCATCTTCATGGTCATAACATTAACAATCCACAATCTTTGAAGCTTTCTTGGAAAACAAGATTGAGAATAGCAATAGAAACTGCTGGGGCCTTAGCATACTTGCATTCTGCTATTTCTATACCAATCATACACAGAGACATCAAAACTACTAATATTCTACTTGATGCTAATCTCACGGCAAAGATTTCTGATTTTGGAGCTTCAAAGATTGTTCCTCTAGATCAAACTGAATTAACCACTTTGGTGCAGGGGACACTAGGGTATCTTGACCCTGAATACATGCACACTAGCCAGTTAACTGAGAAAAGTGATGTGTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACGGGAAAGAAGGCGCTCTCTTTCGCCGTGTCGCCGGAGGTTAGAAACCTTGCCGTATACTTTGTTTCTTCAATGGAAGAAGGATGTTTAGTTCAGATTGTGGATGAACACATTATAAATGAGGCAAACTTGAGGATCTTGTGGAATTTGCCAATGTTGCTAAACAGTGTTTGA 2040 0.4343 MGSQLHLLLHPVLVLVWILCGAADAVTQPNSNCTKRCGSLEIPFPFGTDESCSLDSSFLISCNHTSTPYLTHNNSTVLSISPDGEMRVSAAVARGCYEVNGTRINETSYDKIFNLTHFSFSSSKNKLTVVGCNTIGEVVGYNVIERRNYATGCFSVCLSVNETTSGICTGAGCCQSPIPASGLSDIGIGSYSSGADSYNAVFGNINPCGYAFVAEDGVYNFSSADLVNFRHQSFPVVVDWAVGNQTCEEAQKNTSSYACRADKSECYNSTKGLGYVCKCSTGFGGNPYLVGGCQDVDECMNKEWNDCYSRAICKNVAGNYTCSCPKGYHGDGRENGTKCRRQSRTQFILIIALGVSVGVIALLVTSFYVYWRMKEKRLNKLKEQFFQQNGGFILLQKISRHRGSKETAKLFTVEELKTATNNFDESKILGKGGQGTVYKGLLSDNRTVAIKRSKISGSTQIEQFINEVVLLSQINHRNVVRLLGCCLETEVPLLVYEFIPNGTIFEHLHGHNINNPQSLKLSWKTRLRIAIETAGALAYLHSAISIPIIHRDIKTTNILLDANLTAKISDFGASKIVPLDQTELTTLVQGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGKKALSFAVSPEVRNLAVYFVSSMEEGCLVQIVDEHIINEANLRILWNLPMLLNSV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00682 679 Pfam Calcium-binding EGF domain 295 339 IPR001881 GO:0005509
Arst8g00682 679 Gene3D Phosphorylase Kinase; domain 1 397 498 - -
Arst8g00682 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Arst8g00682 679 SUPERFAMILY Protein kinase-like (PK-like) 406 631 IPR011009 -
Arst8g00682 679 CDD EGF_CA 295 331 - -
Arst8g00682 679 SMART egfca_6 295 340 IPR001881 GO:0005509
Arst8g00682 679 Pfam Protein kinase domain 424 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00682 679 ProSiteProfiles Protein kinase domain profile. 423 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00682 679 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 313 324 IPR000152 -
Arst8g00682 679 Pfam Wall-associated receptor kinase galacturonan-binding 33 88 IPR025287 GO:0030247
Arst8g00682 679 SMART serkin_6 423 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00682 679 SUPERFAMILY EGF/Laminin 294 333 - -
Arst8g00682 679 FunFam Wall-associated receptor kinase 2 499 678 - -
Arst8g00682 679 ProSiteProfiles EGF-like domain profile. 295 334 IPR000742 -
Arst8g00682 679 FunFam Fibrillin 2 290 336 - -
Arst8g00682 679 FunFam Wall-associated receptor kinase 2 393 498 - -
Arst8g00682 679 SMART egf_5 298 340 IPR000742 -
Arst8g00682 679 SMART egf_5 246 294 IPR000742 -
Arst8g00682 679 ProSitePatterns Calcium-binding EGF-like domain signature. 295 322 IPR018097 GO:0005509
Arst8g00682 679 Gene3D Plasmodium vivax P25 domain 228 347 - -
Arst8g00682 679 Gene3D Transferase(Phosphotransferase) domain 1 499 678 - -
Arst8g00682 679 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 665 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00682 Arst-Chr8 9598000 9602206 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00682 28 667 Receptor kinase-like Gene Family AT1G21230 46.605 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst8g00682 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00682 - - aip:107607783 1121.69