Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00679 ATGTGTGGTATACATTCATCAAAGCTGCTTCTTCTTCTTGTTCTTTTGTGGATGGTTTGTGCAGCAGAAGCACAATTAGGCCTAAACTGCCCATCAAGTTGCGGCAACGTCAGCATTCCGTTCCCGTTTGGGACCACCAGGGAGTGCTCCCTCACCCCCGAATTCCTCATCAACTGCACCAACCATGGCCCTTACTTGCCCTCCTACTTATTGGAATACAACGACTATGACTTACAAGTGCTGAACATATCTGTGGACGACGCCGAACTCCTTGTTTCGTTGCCGGTAGCCAGTGATTGCTACTACAACGACACCACAAGCATGGAACAGGACAAATTCTTGAATGATGAAATCGAGTGGCAGTTTAATTTTGGAAATTATAGCATCTCATGGAGCCGAAACGAGTTCACAACCGTTGGTTGTGACACACTGGGATTAGTGTTGACACAGGATTTTTCTGGCGATCTTAAACCCCATGTTAAGACATGCCTTTCTTACTGCGAAGATCGCGCTGATGCAATGACTGAGTCCTGTAATGGCAGTGGTTGTTGCCGTAGTGACATACCCAAGGCCGATGTCAAAGAAGAAGTGTTAACGGGAATCTCTTATGGTTTTGAAAACTCGCTACTCAACAACAGTCATACGATTGAGTACAGCCCTTGCGGTTATGCGTTTGTGGCGGAGAAAGGACGCTATGACTTTATGTCCGCAGATCTGAGTAACACGAAGTTGAGCAATACTCAGTTCCCGGTGGTGCTGGATTGGAGTGTTGGGAACCAGACCTGTGAAGAAGCCAAGAAGAATTATTCCAGCTATGCATGTAAAGGGGCAAACACCACGTGTCAGCCTTCAGAGAAGCGTCCTGGTTACCTATGCAAATGCCTTCCTGGTTTTCGGGGTAACCCTTATCACGAGGATGGTTGCCCACAAGATATTAACGAGTGCGATGGACTCAATGATTGCGTCGAACACGCAACATGCCTCAACGACCCACCAGGAAGCTACACGTGTAAGTGTCCAAAGGGTCTCAAAGGAGATGGGAGAAACAGTGGAACAAAATGCCAAAAGCCCAAACCCGACACACAGATCATACTCATAATTGCGTTGAGTATTAGTGTGTGTGTGATAGCCTTACTCGTGGCGTGCTCTTCCATTTACTGCGCTTTGAAAAAGAGAAAGCTGATTAAAATGAAAGAACACTTGTTTCAACAAAATGGTGGGCTATTGTTACAACAACAAATTGCAACACATCATCGAGGATCAACTCAAACAGCTAAAGTCTTCAGTGTGGAAGAGTTAAAGAAAGCCACCAACAACTTCGATGAATGCAATGTCCTCGGCCAAGGTGGTCAAGGAACCGTTTACAAAGGACTCTTATTGGACAACAGAGTTGTAGCAATCAAAATGTCAAAAATCAGTGACATTAGTCAAGTTGAGCATTTCATCAATGAAGTGGTTGTACTCTCCCAAATCAACCATAGAAATGTGGTTAAGCTCTTGGGTTGTTGCTTAGAAACAAAGGTTCCCCTGCTTGTTTACGAGTTCGTGCCCAATGGTACTATCCATGATCATCTTCATGGTTATACACAAATATCATCAAAGCTTACATGGAAAGTAAGATTGAGAATAGCGGCAGAAACTGCTGGAGCCTTGGCTTACTTGCATTTTGCAACTTCCATTCCCATCATACACAGAGATGTCAAAACCAGTAACATACTCCTTGATCGTGATCTAACCGTAAAGGTTTCCGATTTCGGAGCTTCAAGGATTGTTCCTCTTGATAAAACACAGATAACCACATTGGTGCAAGGAACATTAGGGTATCTTGACCCTGAATACTTTCACACAAGCAAGTTGACTGAGAAAAGCGATGTGTATAGTTTCGGAGTCGTGCTGGCAGAGCTACTTACGGCGAGGAAAGCACTCTCTTTTGATGTGCCTGAAGATGAGAAGAACCTTGCAAAACACTTTGTGTTTTCAATGGAAGAGGGACGTTTACTTGAAATTGTGGAGAAGCACATCGTAGAAGAGGCAAAAGGGGAGGCACTTGTAGAATTTGGCAATATTGCATTGAGATGCTTGAAGTTGAAGGGAGAGGAAAGACCTTCAATGAAACAAGTGGCAATGGAACTTGAGAGACTTAGAGTTGAGGAATGCGGCAACAACAAAGTGATTATTGCATCCTCATCTGCCTTTCATGTTGAAGATGGGAGTGGTGTAATAAGTGATATTAGTACTGGGGTTGATGCTTTAAACCTAGATTCCATGTCATTATTGGGTAATGGAAGATGA 2292 0.4398 MCGIHSSKLLLLLVLLWMVCAAEAQLGLNCPSSCGNVSIPFPFGTTRECSLTPEFLINCTNHGPYLPSYLLEYNDYDLQVLNISVDDAELLVSLPVASDCYYNDTTSMEQDKFLNDEIEWQFNFGNYSISWSRNEFTTVGCDTLGLVLTQDFSGDLKPHVKTCLSYCEDRADAMTESCNGSGCCRSDIPKADVKEEVLTGISYGFENSLLNNSHTIEYSPCGYAFVAEKGRYDFMSADLSNTKLSNTQFPVVLDWSVGNQTCEEAKKNYSSYACKGANTTCQPSEKRPGYLCKCLPGFRGNPYHEDGCPQDINECDGLNDCVEHATCLNDPPGSYTCKCPKGLKGDGRNSGTKCQKPKPDTQIILIIALSISVCVIALLVACSSIYCALKKRKLIKMKEHLFQQNGGLLLQQQIATHHRGSTQTAKVFSVEELKKATNNFDECNVLGQGGQGTVYKGLLLDNRVVAIKMSKISDISQVEHFINEVVVLSQINHRNVVKLLGCCLETKVPLLVYEFVPNGTIHDHLHGYTQISSKLTWKVRLRIAAETAGALAYLHFATSIPIIHRDVKTSNILLDRDLTVKVSDFGASRIVPLDKTQITTLVQGTLGYLDPEYFHTSKLTEKSDVYSFGVVLAELLTARKALSFDVPEDEKNLAKHFVFSMEEGRLLEIVEKHIVEEAKGEALVEFGNIALRCLKLKGEERPSMKQVAMELERLRVEECGNNKVIIASSSAFHVEDGSGVISDISTGVDALNLDSMSLLGNGR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00679 763 Pfam Protein tyrosine and serine/threonine kinase 444 711 IPR001245 GO:0004672|GO:0006468
Arst8g00679 763 SMART egfca_6 311 355 IPR001881 GO:0005509
Arst8g00679 763 Pfam Wall-associated receptor kinase galacturonan-binding 30 90 IPR025287 GO:0030247
Arst8g00679 763 FunFam Wall-associated receptor kinase 2 409 515 - -
Arst8g00679 763 SMART serkin_6 440 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00679 763 ProSiteProfiles EGF-like domain profile. 311 355 IPR000742 -
Arst8g00679 763 SUPERFAMILY EGF/Laminin 310 355 - -
Arst8g00679 763 CDD EGF_CA 311 346 - -
Arst8g00679 763 SUPERFAMILY Protein kinase-like (PK-like) 423 712 IPR011009 -
Arst8g00679 763 ProSiteProfiles Protein kinase domain profile. 440 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00679 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Arst8g00679 763 SMART egf_5 261 309 IPR000742 -
Arst8g00679 763 SMART egf_5 314 355 IPR000742 -
Arst8g00679 763 CDD STKc_IRAK 446 714 - -
Arst8g00679 763 FunFam Fibrillin 2 305 351 - -
Arst8g00679 763 Gene3D Transferase(Phosphotransferase) domain 1 516 731 - -
Arst8g00679 763 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 718 IPR045274 GO:0007166
Arst8g00679 763 FunFam Wall-associated receptor kinase 2 516 731 - -
Arst8g00679 763 Gene3D Phosphorylase Kinase; domain 1 414 515 - -
Arst8g00679 763 Gene3D Laminin 257 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00679 Arst-Chr8 9537739 9541600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00679 9 718 Receptor kinase-like Gene Family AT1G21250 45.517 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst8g00679 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00679 - - ahf:112763858 827.009