Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00678 ATGGATGGGGTTCACACAGGGAAAGTGCTTGGTAAATGCATGGTACCAGGTGCTGGCAGAAGCATGAAAACATTGACCATTGTTGATTACTATATATATGCATCATGTTACAGAGAGAGTACTATAGTAGAAAACACATACATACATACATACATGGCTATTAATGTAAAGCTTCCGCTGATGCTTCTTGTTGCTGTTGCAGCTCTCCATTATTGTGCAGCAGCTAACTGCACACGTAGCTGCGGCTCTGTGAGCATTCCATTCCCGTTTGGGACCACAAAGGAGTGCTCCCTGGCCCCCGAATTCCTTATCTACTGCACCAAACATGTCCCACACTTACAAGACAATCACCTGCGTCTGCGAAGCATCGACGTCGATCACGGCGAACTCCGCGTTTCCTTGCCGGTAGCCAGTGATTGCTACTTCACCAACAGCAGCAGCAAGGGGGGAAAGTTCTTCAACAATGAAACCGATAGGAGCGTGTTTCTGGGAAATTATTATAGCATCTCAACGAGCCAAAACTTGTTCACAACGGTTGGCTGTGAAACACTTGGATTAGTGGTGGGAAGTGATTCAGAGGCAGAGAGAATGAGACCGTTTCCTAAGACATGCTTATCATACTGCGACCGACGTAAAGACGCAAAGGATGGGGAGTGCACCGGAACCGGTTGTTGCAATACTTCTATACCCGATGCCTCACCACAAGGCTTATCGTACATTTATTATTCTTTTGAGAATTCCATTTTGAATAACAGTGAAATATTCGTTGACTTCAACAACCCTTGTGGTTATGCTTTTGTGGTGGAAAAAGGAGAGTACAAGTTTGACACCACACATCTGAAACAAAACCTTCCACCTATGCCTGTAAGGCGCACAACAGCACGTGTCACGATTCCACCAAGCGTCGTGGTTACCTATGCAAATGTTCCTCTGGCTTTCAGGGTAACGCTTATCTCCCTCATGGTTGTAAAGTATATGCGACATTATATATCACATATTGCTTCAGATGATGTTGATGAGTGCAAGACACCCAATAAATTTTGCCATGCCAATGCAACATGCAACAACACATATGGGAGCTACACTTGTGCGTGTCAGAAAGGTGGTGGAAGTGCTGGTGCTAGTGGTGGTAGAAGTGCTGATGTCGGTGGAAGTGGAGTTGTCAGTTTAAGCATCTTAGTGTTATTTGTGGCGAGCTTTAATGCTTATTGTGGATTGAGAAAAAGGAAGCTCAACAAACTTAAAGAACAGTTTTTTCAACAAAATGGTGGTCTATTGTTACAACAAAAAATTGCTAAACATAGAGGTTCAATTGAAACAACTAAAATCTTTAGCATAGAAGAGCTAAAGAAGGCCACCAACAACTTTGATGAAGTCAAGATCTTAGGCCGAGGAGGCTATGGAATAGTTTACAAAGGATTATTACAAGACAACACAACTGTTGCAATCAAAAAGTCCAAAATCAGTGACCAAAGCCAGATTGAACAATTCATCAATGAGGTGGTTATACTTTCCCAAATCAACCATACAAATGTGGTCAAACTTTTGGGGTGTTGCTTAGAGACACAAGTTCCATTGCTTGTTTATGAATTCATTCAAGGTGGTACTCTTGATGATCATCTTCATGGTCAGAACCAATCTTTAAAGCTTAACTGGAAAACAAGATTGAGAATAGCAGCAGAAACTGCTGGGGCTTTGGCATACTTGCATTCTGCTACTTGTCCACCAATCATACATAGAGATGTTAAAACTACCAACATACTTCTTGATCATAATCTCAAAGCAAAGGTTTCTGATTTCGGAGCTTCAAAGATTGTTCCCCTTGATAAAGCCGAACTATCCACCCTGGTGCAAGGGACTGTGGGGTATCTAGACCCTGAATACTTCCACACAAGCCACTTAACAGAAAAGAGTGATGTGTATAGTTTCGGAGTCGTTCTAGCAGAGTTACTTACAGGACGAAAAGCACTTTGTTTTGATTTGCCTGAGGATGATAGAAACCTTGCAATGTACTTCATTTCTTCAATGAATAAGGGTCGCTTACTTCAGATTCTGGACAATCAGATAAGAAATGAGGCAAAGCCCGAGCAGCTCATGGAATTTGCCAATATTGCAAAACGATGTTTGAGGTTGAAGGGAGAAGAAAGACCTACCATGAAAGAAGTGGCAACTGAACTTGAGGGACTTAGAATAATGGAAAATCATAGGTGGGAAAGTGATAGATCGTCTTTGGAAGAGACTGAAGATTTGCTCAATGCATCACCATCATCATCATCATTGGCTTTTTACAGTGAAGATAATGGATCTTATGGAAGGGACATTATTTCTAGATTGGAAAGCATAGTTTACAAGGTTAAGAATCTTCTAACTCCACCAAAATGCCAAAAGCTAGATTCCATGTCATTAGGTAGTGAAAGACTGGAAGATGACAATGCAAGTTGA 2442 0.4169 MDGVHTGKVLGKCMVPGAGRSMKTLTIVDYYIYASCYRESTIVENTYIHTYMAINVKLPLMLLVAVAALHYCAAANCTRSCGSVSIPFPFGTTKECSLAPEFLIYCTKHVPHLQDNHLRLRSIDVDHGELRVSLPVASDCYFTNSSSKGGKFFNNETDRSVFLGNYYSISTSQNLFTTVGCETLGLVVGSDSEAERMRPFPKTCLSYCDRRKDAKDGECTGTGCCNTSIPDASPQGLSYIYYSFENSILNNSEIFVDFNNPCGYAFVVEKGEYKFDTTHLKQNLPPMPVRRTTARVTIPPSVVVTYANVPLAFRVTLISLMVVKYMRHYISHIASDDVDECKTPNKFCHANATCNNTYGSYTCACQKGGGSAGASGGRSADVGGSGVVSLSILVLFVASFNAYCGLRKRKLNKLKEQFFQQNGGLLLQQKIAKHRGSIETTKIFSIEELKKATNNFDEVKILGRGGYGIVYKGLLQDNTTVAIKKSKISDQSQIEQFINEVVILSQINHTNVVKLLGCCLETQVPLLVYEFIQGGTLDDHLHGQNQSLKLNWKTRLRIAAETAGALAYLHSATCPPIIHRDVKTTNILLDHNLKAKVSDFGASKIVPLDKAELSTLVQGTVGYLDPEYFHTSHLTEKSDVYSFGVVLAELLTGRKALCFDLPEDDRNLAMYFISSMNKGRLLQILDNQIRNEAKPEQLMEFANIAKRCLRLKGEERPTMKEVATELEGLRIMENHRWESDRSSLEETEDLLNASPSSSSLAFYSEDNGSYGRDIISRLESIVYKVKNLLTPPKCQKLDSMSLGSERLEDDNAS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00678 813 Gene3D Phosphorylase Kinase; domain 1 427 531 - -
Arst8g00678 813 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 74 736 IPR045274 GO:0007166
Arst8g00678 813 Pfam Calcium-binding EGF domain 337 368 IPR001881 GO:0005509
Arst8g00678 813 ProSiteProfiles Protein kinase domain profile. 456 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00678 813 FunFam Wall-associated receptor kinase 2 532 749 - -
Arst8g00678 813 SUPERFAMILY EGF/Laminin 331 368 - -
Arst8g00678 813 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 354 365 IPR000152 -
Arst8g00678 813 SUPERFAMILY Protein kinase-like (PK-like) 440 731 IPR011009 -
Arst8g00678 813 Pfam Wall-associated receptor kinase galacturonan-binding 77 132 IPR025287 GO:0030247
Arst8g00678 813 Pfam Protein tyrosine and serine/threonine kinase 460 726 IPR001245 GO:0004672|GO:0006468
Arst8g00678 813 FunFam Wall-associated receptor kinase 2 426 531 - -
Arst8g00678 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Arst8g00678 813 FunFam Fibrillin 2 332 376 - -
Arst8g00678 813 Gene3D Laminin 337 374 - -
Arst8g00678 813 SMART serkin_6 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00678 813 Gene3D Transferase(Phosphotransferase) domain 1 532 752 - -
Arst8g00678 813 ProSitePatterns Calcium-binding EGF-like domain signature. 337 363 IPR018097 GO:0005509
Arst8g00678 813 ProSiteProfiles EGF-like domain profile. 337 380 IPR000742 -
Arst8g00678 813 ProSitePatterns Protein kinases ATP-binding region signature. 462 485 IPR017441 GO:0005524
Arst8g00678 813 CDD STKc_IRAK 462 729 - -
Arst8g00678 813 SMART egfca_6 337 381 IPR001881 GO:0005509
Arst8g00678 813 CDD EGF_CA 337 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00678 Arst-Chr8 9528281 9532838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00678 76 767 Receptor kinase-like Gene Family AT1G21250 41.851 1.86e-160 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst8g00678 PK_Tyr_Ser-Thr 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00678 - - ahf:112763858 1210.67