Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00614 ATGTCAAGAAATGCATCATCAACAACTCTTCTTATCCTTTTTCTTCTTAACATCTCTTTGCTTCTTCCACCACAAATCTCTTCTCTGAACCAAGAAGGACTCTCACTACTTTCATGGATTTCAACCTTCAATTCCTCTAACTCTGCTACTGCTTCTTCCTTCTTCTCTTCATGGGATCCAACTCATGAGAATCCATGCAGATGGGACTACATAAAGTGTTCCAAACAAGGCTTTGTCTCAGAGATCATAGTACAATCCATTGATCTTCATAGCACCTTTCCAACACAGCTTGTTTCCTTCAACCACCTTGAAACTCTTGTAATCTCCAATGGAAACCTCACAGGAACCATTCCAGATGAAATAGGACAGCTTTACAACCTTCAATGGCTATCCTTGAATTCAAACGCCTTAAATGGTGAAATTCCAACAACAATTGGAAACCTTACAAAGCTTCAGCAGCTAGCACTCTATGACAACCAGCTCTCTGGAATGATCCCCGGCGAAATAGGCCGGCTGGCGAATCTTGAAACGCTTCGAGCTGGAGGCAATCCGGGCATCCACGGCGAAATTCCAATGCAGATATCAAACTGCAAGGCTCTTGTTTTTCTTGGACTAGCAGATACCGGAGTTTCTGGGGAGATTCCACCAACAATAGGAGAACTCACCAATCTTCAAACACTTTCAGTATACACTGCACATCTCACAGGTCACATTCCACCAGAGATTCAAAACTGTTCATCTTTGGAAAACTTGTTCCTATATGAAAACCAGCTTTCAGGGAACATCCCTGATGAGTTAGGCTCTATGCAAAGCCTTAAGAGAGTGTTGCTTTGGCAGAACAATCTAAGTGGTACAATTCCAGAGAGTCTTGGAAACTTGACTAATCTGAAGGTGATAGATTTCTCTTTGAATTCTCTGGCTGGTGAATTACCTTTTAGTCTCAGTAATCTACTCTCATTAGAGGAGCTTCTTTTGTCTGATAACAACATTACTGGAGAAATTCCTTCCTATATTGGAAACTTTTCGAGGCTGAAGCAACTCGAATTGGATAACAACAAGTTCTCTGGAGAGATTCCAACTGTCTTGGGGAATCTCAAGGAGCTTACTCTCTTCTTTGCCTGGCAGAATCAGCTCCATGGAAGCATACCAGCTGAACTCTCTGACTGCAAGAAGCTTGAAGCAATTGATCTTTCGCATAACTTCCTCACCGGTTCGATTCCTCGAACACTGTTTCATCTAGAGAATTTAACTCAGTTGTTGTTGATATCAAACATGCTTTCAGGACAAATTCCACCAGATATTGGCAGCTGCACTAGGCTGAGCAGGTTGCGCTTGGGATCGAACAATTTCACCGGTCATATTCCACCAGAAATAGGCCTTTTAAACCGGCTGAGCTTCCTCGAGTTATCAGATAATATGCTCAGTGGAGATATTCCCACTGAGATTGGTAACTGTGCTAATCTAGAGATGCTTGATCTGCACGGCAATGCCCTGCAAGGAACAGTTCCTTCCTCATTAGAATTCCTAGTTTCTTTGAATGTCTTGGATCTTTCTGCAAATCAAATAAGTGGAAGCATTCCTGGAAACTTGGGAAAACTTTCATCTCTAAACAAGTTGATTCTAAGTGGAAACCATATCAGTGGTTTGATTCCTCTGTCACTAGGCCTCTGCATGAATCTGCAGTTGCTGGATATAAGTAACAACATGATCATTGGTTCGATTCCCGATGAGATTGGCCACTTGCAAGGCCTAGATATCCTCTTGAACTTGAGTTGGAATTCTCTAACAGGCACCATTCCAGAGACCTTTTCGAATCTTTCGAAACTTTCCATATTAGACCTCTCTCACAACAAGCTCTCAGGCACCCTCCGTGTGCTAAGCAGTCTTGAAAATCTTGTCTCTCTAAATGTCTCCTACAACAGATTTTCTGGTTCTCTCCCTGATACCAAGTTCTTCCGCGATCTCCCTCCGGCTGCATTCGCTGGCAACCCTGAGCTTTGCCTTAACAAGTGTCGTCCGGAGGGAGATCGCCAAGAAGCAAAGTCAGTAAGAAACATCCTTATCTACACTTTCCTTGGTGTTATTTTAACATCTATTGTTGTAACCTTGGGAGTAATCTTAGCACTCAGAATTCAAGGGGCTACTTTTGGGACAAAATTTGAGGAAGGTGGTGAGCTTGAATGGGCTTTCACTCCATTCCAAAAGCTCAACTTCTCAATCAATGACATTGTCACAAAGCTAACAGATTCAAACATCGTGGGAAAAGGTTGCTCAGGGATCGTTTATCGAGTAGAGACTCCAATGAAACAGTTAATTGCAGTTAAGAAGTTGTGGCCAATAAAAAGCGACGAGCCGCCACCAGAGAGAGACCAGTTTTCTGCTGAAGTTCAGGCCCTTGGATCAATAAGGCACAAGAACATTGTAAGACTCTTAGGATGCTGTGACAACGGACGAACTCGGCTGCTCTTGTTTGATTACATATGCAATGGGAGCTTGTTTGGATTGCTCCATGAGAAGAGATTGTTCTTGGATTGGGATGCAAGGTACAAGATCATGCTTGGAGCAGCTCATGGTTTGGAATATCTTCATCATGATTGTATCCCTCCAATTGTTCATAGGGATATCAAGGCCAATAACATCTTAGTTGGTCCACAATTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCCAAACTTGTCAATTCATCAGATTGTTCTGCAGCCTCTAACATTGTTGCAGGCTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTGAGGATCACAGAGAAAAGTGATGTGTATAGTTTCGGAGTGGTGCTACTCGAGGTGTTAACAGGGATGGAGCCAACAGATAACAGGATTCCAGAGGGTGCACATATTGTCACCTGGGTTAGCTATGAAATCAGAGTGAAGAAAAGAGACTTCACATCAATCCTTGACCAGAATCTGATACTGCAATGTGGAACAAGGATCCCTGAGATGCTTCAAGTTCTTGGAGTGGCTCTCCTATGTGTGAATCCTTGCCCAGAAGAAAGGCCTGCCATGAAAGATGTAACAGCAATGCTTAAGGAGATCAGACATGAAAATGATGAATTCGAGAAGCCCAATTTCCTCCATAAAGGCATGGTTACAAATCCTAAAGCGGCTGTTCATTGTTCAAGTTTCTCTAGATCATGTCAGCCACTAATAGATTCACCATCTTCTTCTTCATAG 3216 0.4266 MSRNASSTTLLILFLLNISLLLPPQISSLNQEGLSLLSWISTFNSSNSATASSFFSSWDPTHENPCRWDYIKCSKQGFVSEIIVQSIDLHSTFPTQLVSFNHLETLVISNGNLTGTIPDEIGQLYNLQWLSLNSNALNGEIPTTIGNLTKLQQLALYDNQLSGMIPGEIGRLANLETLRAGGNPGIHGEIPMQISNCKALVFLGLADTGVSGEIPPTIGELTNLQTLSVYTAHLTGHIPPEIQNCSSLENLFLYENQLSGNIPDELGSMQSLKRVLLWQNNLSGTIPESLGNLTNLKVIDFSLNSLAGELPFSLSNLLSLEELLLSDNNITGEIPSYIGNFSRLKQLELDNNKFSGEIPTVLGNLKELTLFFAWQNQLHGSIPAELSDCKKLEAIDLSHNFLTGSIPRTLFHLENLTQLLLISNMLSGQIPPDIGSCTRLSRLRLGSNNFTGHIPPEIGLLNRLSFLELSDNMLSGDIPTEIGNCANLEMLDLHGNALQGTVPSSLEFLVSLNVLDLSANQISGSIPGNLGKLSSLNKLILSGNHISGLIPLSLGLCMNLQLLDISNNMIIGSIPDEIGHLQGLDILLNLSWNSLTGTIPETFSNLSKLSILDLSHNKLSGTLRVLSSLENLVSLNVSYNRFSGSLPDTKFFRDLPPAAFAGNPELCLNKCRPEGDRQEAKSVRNILIYTFLGVILTSIVVTLGVILALRIQGATFGTKFEEGGELEWAFTPFQKLNFSINDIVTKLTDSNIVGKGCSGIVYRVETPMKQLIAVKKLWPIKSDEPPPERDQFSAEVQALGSIRHKNIVRLLGCCDNGRTRLLLFDYICNGSLFGLLHEKRLFLDWDARYKIMLGAAHGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSSDCSAASNIVAGSYGYIAPEYGYSLRITEKSDVYSFGVVLLEVLTGMEPTDNRIPEGAHIVTWVSYEIRVKKRDFTSILDQNLILQCGTRIPEMLQVLGVALLCVNPCPEERPAMKDVTAMLKEIRHENDEFEKPNFLHKGMVTNPKAAVHCSSFSRSCQPLIDSPSSSS 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00614 1071 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 723 826 - -
Arst8g00614 1071 Pfam Protein kinase domain 749 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00614 1071 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Arst8g00614 1071 Gene3D Ribonuclease Inhibitor 411 682 IPR032675 -
Arst8g00614 1071 Gene3D Transferase(Phosphotransferase) domain 1 827 1044 - -
Arst8g00614 1071 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 185 309 - -
Arst8g00614 1071 SMART serkin_6 747 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00614 1071 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Arst8g00614 1071 Pfam Leucine rich repeat 588 642 IPR001611 GO:0005515
Arst8g00614 1071 Pfam Leucine rich repeat 488 546 IPR001611 GO:0005515
Arst8g00614 1071 SUPERFAMILY Protein kinase-like (PK-like) 737 1023 IPR011009 -
Arst8g00614 1071 SUPERFAMILY RNI-like 87 403 - -
Arst8g00614 1071 ProSitePatterns Protein kinases ATP-binding region signature. 753 781 IPR017441 GO:0005524
Arst8g00614 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672|GO:0006468
Arst8g00614 1071 Gene3D Ribonuclease Inhibitor 247 410 IPR032675 -
Arst8g00614 1071 Gene3D Phosphorylase Kinase; domain 1 720 826 - -
Arst8g00614 1071 SMART LRR_typ_2 317 341 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 148 172 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 606 628 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 533 556 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 461 485 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 629 662 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 509 532 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 269 293 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 581 605 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 124 147 IPR003591 -
Arst8g00614 1071 SMART LRR_typ_2 413 437 IPR003591 -
Arst8g00614 1071 ProSiteProfiles Protein kinase domain profile. 747 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00614 1071 Pfam Leucine Rich Repeat 559 581 IPR001611 GO:0005515
Arst8g00614 1071 Pfam Leucine Rich Repeat 391 413 IPR001611 GO:0005515
Arst8g00614 1071 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Arst8g00614 1071 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 391 675 - -
Arst8g00614 1071 ProSiteProfiles Leucine-rich repeat profile. 608 630 IPR001611 GO:0005515
Arst8g00614 1071 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 827 1041 - -
Arst8g00614 1071 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 339 1025 - -
Arst8g00614 1071 SMART LRR_sd22_2 606 631 - -
Arst8g00614 1071 SMART LRR_sd22_2 124 150 - -
Arst8g00614 1071 SMART LRR_sd22_2 509 538 - -
Arst8g00614 1071 SMART LRR_sd22_2 461 487 - -
Arst8g00614 1071 SMART LRR_sd22_2 389 418 - -
Arst8g00614 1071 SMART LRR_sd22_2 317 343 - -
Arst8g00614 1071 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 339 1025 - -
Arst8g00614 1071 Gene3D Ribonuclease Inhibitor 184 246 IPR032675 -
Arst8g00614 1071 SUPERFAMILY RNI-like 334 646 - -
Arst8g00614 1071 FunFam Nuclear pore complex protein NUP107 29 184 - -
Arst8g00614 1071 PRINTS Leucine-rich repeat signature 512 525 - -
Arst8g00614 1071 PRINTS Leucine-rich repeat signature 606 619 - -
Arst8g00614 1071 ProSiteProfiles Leucine-rich repeat profile. 511 534 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00614 Arst-Chr8 8641472 8645095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00614 28 1054 Receptor kinase-like Gene Family AT5G56040 46.933 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst8g00614 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00614 - - gmx:100780101 1675.99