Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00605 ATGGACAAGAAGTTATGCCTCTTGTTCATTTTCTCAGCATCAATTTTGTTCATTGTTGGAGCTGAGCCAGTGGAAGATAAACAAGCCTTGCTTGATTTCCTTCACAACATGAACCACCCTTATAATCTCAACTGGAATGAGAACTCTTCTGTATGCACAAGCTGGAGAGGAGTAACATGCAACGCCGGCCGGTCCAGAGTTATCGCGCTCCGGTTGCCAGCGGCCGGATTAAGTGGTCAAATCCCAAACAACACTCTTGGTCAACTTTCAGCGCTTCAGATTCTGAGTCTTCATTCAAATGGTATAACTGGTCCTTTCCCTAATGATTTCTCTGAGCTGAAGAACTTAACAAGCCTCTATCTCCAATCCAACAAGATTTCTGGCCCTCTGCCATTGAATTTCTCAGTTTGGAATAGTCTTACAATATTGAATTTATCTAACAACTTTTTCAATGGTACCATACCTTTTTCAATTTCGAATATGACTCATCTTGAATCATTAATCCTTGCCAACAATTCACTTTCTGGTGAAATACCAGATCTCAACATTCCTAGTCTCAAAGAGCTTGATTTGGCAAACAATAATCTTAGTGGTGTTGTTCCTAAATCCCTTCTTAGATTTCCAATTAGAGACTTTGCTGGTAACAATAATCTTACCTATGGAAATGCCCTTTCCCCTGCAATTCCCCTGCAACCGCCCAATGATCAACCAGCTAAGAAGAAACACATCAGGATCAGCGAGCAAACGCTGTTGGCTATCATAATTGGTGCTTGTGTGCTTGGATTTGCTGTGGTTGCAGCCTTCATGATTGCGTGCATGTATGGGAAAAACAACGAAAATGAGCTACCCGTTGAGTCCAAGAAAAAAGAAGTTCCTCTGAAGAAGCAATCTTCTGATAGCCAAGAGTCTCAGGACAAGAACAAGATTGTGTTCTTTGAAGGTTGCAGTCTTGCATTTGACTTAGAGGATCTACTGAGAGCTTCTGCTGAGATTCTAGGAAAGGGGACATTCGGCATGACATATAAGGCTTCTCTAGATGAGAATACCACAGTGGTGGTGAAGAGGTTGAAAGAGGTTACAGCTGGAAAAAGAGAATTTGAACAGCAAATGGAAATTGTGGGGAGAATTAAGCATGACAATGTGGATGCATTAAGGGCATATTACTACTCAAAGGAGGAGAAACTCATAGTATATGATTTCTATCAACAAGGCAGCGTTTCTGCATTGTTGCATGGAAAAAGAGGGGAAGGAAGAATCCCTTTAGACTGGGAGAGCCGTCTAAGAATCGCAATAGGCGCAGCAAGAGCCATTGCTCACATCCATGCTCAACACGGAGGGAAACTAGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATACGGTTGTGTATCGGACACTGGTTTGGCAACCCTGATGAGTCCATTGCCTGCACCTGCAACACGTGCTGCTGGATACCGTGCCCCAGAAGTAACTGACACCCGAAAATCAACACATGCATCTGATGTCTATGCTTTCGGGGTCCTAGTACTCGAGCTTCTGACAGGGAAGTCACCAGTACCTGCTGCCGGAGGCGAGGAAGTTATGCATTTGGTTAGATGGGTGAATTCTGTGGTCAGAGAAGAATGGACTGCAGAGGTGTTTGATGTGGAGCTTCTGAGGTATCCAAATATAGAGGAAGAAATGGTGGAGATGCTGCAAATAGGGATGGCTTGTGCCTCAAGAATACCGGATCAGAGACCGAAAATGACAGAGGTGGTGAGAATGATGGAGGAAATTCGTCGTGTAAACACTGGAAATCCACCTTCCACTGGATCTAGATCAGAAGTTTCTACTCCAACAACTTATGCAGTTGACATGATGGTGGCTTCTACATCGGTCCCACAGTGA 1902 0.4374 MDKKLCLLFIFSASILFIVGAEPVEDKQALLDFLHNMNHPYNLNWNENSSVCTSWRGVTCNAGRSRVIALRLPAAGLSGQIPNNTLGQLSALQILSLHSNGITGPFPNDFSELKNLTSLYLQSNKISGPLPLNFSVWNSLTILNLSNNFFNGTIPFSISNMTHLESLILANNSLSGEIPDLNIPSLKELDLANNNLSGVVPKSLLRFPIRDFAGNNNLTYGNALSPAIPLQPPNDQPAKKKHIRISEQTLLAIIIGACVLGFAVVAAFMIACMYGKNNENELPVESKKKEVPLKKQSSDSQESQDKNKIVFFEGCSLAFDLEDLLRASAEILGKGTFGMTYKASLDENTTVVVKRLKEVTAGKREFEQQMEIVGRIKHDNVDALRAYYYSKEEKLIVYDFYQQGSVSALLHGKRGEGRIPLDWESRLRIAIGAARAIAHIHAQHGGKLVHGNIKASNIFLNSQGYGCVSDTGLATLMSPLPAPATRAAGYRAPEVTDTRKSTHASDVYAFGVLVLELLTGKSPVPAAGGEEVMHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACASRIPDQRPKMTEVVRMMEEIRRVNTGNPPSTGSRSEVSTPTTYAVDMMVASTSVPQ 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00605 633 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00605 633 FunFam pollen receptor-like kinase 1 295 400 - -
Arst8g00605 633 Pfam Leucine Rich Repeat 139 160 IPR001611 GO:0005515
Arst8g00605 633 Pfam Leucine Rich Repeat 185 205 IPR001611 GO:0005515
Arst8g00605 633 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Arst8g00605 633 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Arst8g00605 633 Gene3D Ribonuclease Inhibitor 138 227 IPR032675 -
Arst8g00605 633 Gene3D Transferase(Phosphotransferase) domain 1 402 609 - -
Arst8g00605 633 ProSiteProfiles Leucine-rich repeat profile. 185 206 IPR001611 GO:0005515
Arst8g00605 633 SUPERFAMILY L domain-like 27 207 - -
Arst8g00605 633 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 605 - -
Arst8g00605 633 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Arst8g00605 633 Pfam Leucine rich repeat 81 126 IPR001611 GO:0005515
Arst8g00605 633 Gene3D Ribonuclease Inhibitor 25 137 IPR032675 -
Arst8g00605 633 PANTHER OS05G0588300 PROTEIN 9 604 - -
Arst8g00605 633 SUPERFAMILY Protein kinase-like (PK-like) 330 595 IPR011009 -
Arst8g00605 633 FunFam Probable inactive receptor kinase RLK902 23 182 - -
Arst8g00605 633 Pfam Protein tyrosine and serine/threonine kinase 330 593 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00605 Arst-Chr8 8580006 8583415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00605 15 618 Receptor kinase-like Gene Family AT4G23740 56.340 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst8g00605 PK_Tyr_Ser-Thr 9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00605 - - gmx:100809359 919.457