LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g00600	ATGGTGGATGTAACTGTAGATAAAGCAGAGGTAGATCTAATTAATGTTGATGGTTTTGAAAAGTTGATAACTGAGTTGACCATCGAAGACATATGGAGATTGGTGTTTGATACGAAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCAAAAATACTTGAAGATGGTGGATGTTAATGGCAACATTAATACAAGACAATTGGTTTGCAATAAAGTAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGATAATTACTCGTGTCAACTGCAAGGCTAGGATTCGTTTCATTCGTCACTATAGAACGGGTGGATACGATAAAGTGGGTTTTACTTGCAAAGACCTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTATCTGTTGTCCAAGATAGACAGTGACCCGTTATTTCTAGGAAAGTTCACCTTAAAAGATGGTAGATTGGATAATTTGATGTGGGCTGATGGAGCAAGCATTGTTGATTACAAATATTTTGGTGATGTACTCGCTTTTGACACCACTTACAAGAAAAATATCTACAACAAGCCCTTAGTTATATTTTCAGGGACCAACCACCATGGCTAA	666	0.3874	MVDVTVDKAEVDLINVDGFEKLITELTIEDIWRLVFDTKSQVCEFYAKYAKCYGFVSQKYLKMVDVNGNINTRQLVCNKVGERHWKHLKRDNRQREHRIITRVNCKARIRFIRHYRTGGYDKVGFTCKDLHNHISKTRRGKVKDGDAFAALAYLLSKIDSDPLFLGKFTLKDGRLDNLMWADGASIVDYKYFGDVLAFDTTYKKNIYNKPLVIFSGTNHHG	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g00600	221	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	34	221	IPR031052	GO:0006355
	Arst8g00600	221	Pfam	FAR1 DNA-binding domain	44	133	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g00600	Arst-Chr8	8454516	8455361	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst8g00600		FAR1	1e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g00600	-		-	adu:127741201	460.685