Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00592 ATGGATGATAACAACTTATCAGATATCTTCCAAGACAAAGACTTTGGTGGAGACGATCTCTTCGCCATCTTGGAAAGCCTCGATGACTTCCCTCCCACCAACACCGGACAATTTTCCACCCTACTTGAATCATCATCACTGCCCTCGCCTCCAACCAAACGACGGAAACTACTTGTTCCGCCGCCACCGCCTTCTCCCAACGCCGCCGAGGATGGACAACAAAGGATGTCTCATATCACGGTCGAGCGCAACCGTAGAAAGCAGATGAACGAGCATTTGTCCGTCCTCAGATCCCTCATGCCTTGCTTTTACGTCAAGCGAGGTGATCAAGCATCCATAATTGGAGGGGTGGTTGATTACATCAACGAGTTGCAACAAGTTCTTCAAGCACTTGAAGCAAAGAAACAAAGAAAAGTTTACACTGATCATGTTCTAAGCCCTAGGCTCGTCTCAAGCCCAAGGACTTCACTATCACTACCACTCAGCCCACGGAAACCACCCTTGAGCCCTAGGCTAAGCCTGCCCATAAGCCCAAGGACTCCTCAACCAGGTAGCCCATACAGGCCGCCGGCGCCCTGCAGGCTGTTGCAGCCCGCGGCCACCGCGGCCGCAGCAGCAAGCAGTTACATTTCACCGGCGGCGTCGATATCGAACTCTCTTGAGCCATCTCCAACCACGTCTTCCGCCTCCTCCATCAATGATGACATCAACGAGCTCGTTGCGAATTCAAAATCTGCCATGGCTGAGGTTGAGGTCAAGTTCTCGGGTCCTCACCTTCTTCTGAAAACGGTGTCGCAGCGAATTCCCGGGCAAGCATTGAAGATCATTTCAGCGCTTGAAGATCTTGCGCTTGAAATTCTTCAAGTCAATATCAGCACTGCTGATGAAACCATGCTTAACTCATTCACTATCAAGATTGGAATTGAATGCCAACTCAGTGCGGACGAACTAGCCCAACAAATCCAGCAAACATTCTGCTAG 981 0.5066 MDDNNLSDIFQDKDFGGDDLFAILESLDDFPPTNTGQFSTLLESSSLPSPPTKRRKLLVPPPPPSPNAAEDGQQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQALEAKKQRKVYTDHVLSPRLVSSPRTSLSLPLSPRKPPLSPRLSLPISPRTPQPGSPYRPPAPCRLLQPAATAAAAASSYISPAASISNSLEPSPTTSSASSINDDINELVANSKSAMAEVEVKFSGPHLLLKTVSQRIPGQALKIISALEDLALEILQVNISTADETMLNSFTIKIGIECQLSADELAQQIQQTFC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00592 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 149 IPR036638 GO:0046983
Arst8g00592 326 MobiDBLite consensus disorder prediction 34 51 - -
Arst8g00592 326 Pfam Helix-loop-helix DNA-binding domain 74 125 IPR011598 GO:0046983
Arst8g00592 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 124 IPR011598 GO:0046983
Arst8g00592 326 MobiDBLite consensus disorder prediction 54 68 - -
Arst8g00592 326 PANTHER TRANSCRIPTION FACTOR FAMA 45 325 IPR044283 GO:0003700|GO:0010052
Arst8g00592 326 MobiDBLite consensus disorder prediction 34 75 - -
Arst8g00592 326 SMART finulus 79 130 IPR011598 GO:0046983
Arst8g00592 326 MobiDBLite consensus disorder prediction 163 191 - -
Arst8g00592 326 FunFam Transcription factor SPEECHLESS 65 139 - -
Arst8g00592 326 CDD bHLH_AtFAMA_like 76 142 - -
Arst8g00592 326 Gene3D - 66 151 IPR036638 GO:0046983
Arst8g00592 326 Coils Coil 117 141 - -
Arst8g00592 326 MobiDBLite consensus disorder prediction 151 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00592 Arst-Chr8 8355488 8357836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00592 10 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 53.153 4.02e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g00592 HLH 7.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00592 K20558 - rcu:8274388 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00592 8 8355488 8357836 Arst8g00592 8 8355488 8357836 ECH