Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00583 ATGAACTATATGTTTATTCTCATTGCCACTTTCAAGATTATAAAGACGAAGATAACGAAATTACAAGAGGCAATGGGAGTTCCAACATCACACAGCACTAAAAGGATAACACAACCTATTTTCAAAGTAAAAGAAGAGGCATCATTAACAGATTCTAACGAACGCACTCTAATTCGTCGAAGGATTCTCATGGATTCCAATAATAATGACACGTGTTCCTTCTCCTTACCCTACGATTCATGGATGGTAAAGCACCCTTCAGCATTGCACTCATTTGATAGATTGATGAACTCAGCAATGGGGAAGAGGATCATCGTTTTCCTAGACTATGATGGCACCTTATCACCAATTGTCAATGACCCTGATCGAGCTTTCATGTCTGATGAGATGCGTGCTGCAGTCCGTGAAGTTGCTACTTATTTTCCAACAGCAATAATCAGTGGAAGAAGCAGAGAAAAGGTAAAAGATTTTGTGAAGTTAAATAATTTATATTATGCTGGGAGCCATGGAATGGACATAATGGCACCATTAATGGCAATTGGATCTTCTAATGCTAAGCATTGTGACATGAACCTTAACACAAAAGGCAATGGAGTGCCCTTTCAACCCGCCAAGAAGTTTTTGCCGGCAATTCAGCAGATAGTTAGAAGATTAGAGAATGAAGTAAAGGATATAAAAGGTGCAAGGGTAGAGGACAATGGATTCTGTCTCTCTGTACATTTTCGACAAGTTCAAGAACAGGATTATGGTGTTTTGGAGAAGAAAGTGAAATGTGTGCTTGAAGAGAATCCACAATTTCGGTTAACTGAGGGTAAAAAGGTCTTGGAAATAAGACCATCCATAGAATGGAACAAAGGCAATGCTGTTGAGTATTTTCTTGACACTTTAGGCTTAAATTCTTCTACCAATATCCTTCCTCTCTATATTGGAGATGATCGAACTGATGAAGATGCATTTAAGGTAATAAAGAGAAGAGGTCAAGGGTATCCAATTCTAGTGTCTTCAATTCCAAGAGAAACAAATGCTTTCTACTCTTTGCGTGACCCATCAGAAGTACTAATCTTCTTGACAAAGCTTGCAAAATGGATGAAAAGCTCTTCTATCCCAAAACCATGCCCTTAA 1122 0.385 MNYMFILIATFKIIKTKITKLQEAMGVPTSHSTKRITQPIFKVKEEASLTDSNERTLIRRRILMDSNNNDTCSFSLPYDSWMVKHPSALHSFDRLMNSAMGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVREVATYFPTAIISGRSREKVKDFVKLNNLYYAGSHGMDIMAPLMAIGSSNAKHCDMNLNTKGNGVPFQPAKKFLPAIQQIVRRLENEVKDIKGARVEDNGFCLSVHFRQVQEQDYGVLEKKVKCVLEENPQFRLTEGKKVLEIRPSIEWNKGNAVEYFLDTLGLNSSTNILPLYIGDDRTDEDAFKVIKRRGQGYPILVSSIPRETNAFYSLRDPSEVLIFLTKLAKWMKSSSIPKPCP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00583 373 Gene3D - 203 369 IPR023214 -
Arst8g00583 373 Gene3D - 104 185 IPR023214 -
Arst8g00583 373 Pfam Trehalose-phosphatase 107 350 IPR003337 GO:0003824|GO:0005992
Arst8g00583 373 FunFam Trehalose 6-phosphate phosphatase 209 367 - -
Arst8g00583 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 53 367 IPR044651 GO:0004805|GO:0005992
Arst8g00583 373 CDD HAD_TPP 106 352 - -
Arst8g00583 373 SUPERFAMILY HAD-like 105 363 IPR036412 -
Arst8g00583 373 FunFam Trehalose 6-phosphate phosphatase 104 190 - -
Arst8g00583 373 NCBIfam HAD-IIB family hydrolase 105 325 IPR006379 -
Arst8g00583 373 NCBIfam trehalose-phosphatase 101 360 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00583 Arst-Chr8 8093113 8103027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00583 106 371 Trehalose Biosynthesis Gene Families AT1G60140 25.623 4.59e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00583 K01087 - gmx:100819120 536.569