LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g00581	ATGATGGAGTGCAACAGGGATGAGGCAATTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGTTGGTGCAAAGAAGTTGGCTCTCAAGGCTCTAAATCTCTATCCGGCATTGGAGGATCTTCCCCAGTTTTTGCAAACAATTGAAATTTTTATCTCTGCTGAGAATAAAATTAGTGGAGAAATGGATTGGTATGGTATACTTGGTGTGAGCCCTTTTGCCGACGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCTCTCTCTCTCCACCCCGACAAAAACAAGTGTTTAGGTGCAGAGGGTGCATTCAAGCTGGTTTCCGAGGCATGGAGTTTGCTATCAGACAAGACCAAGAGACTAGAATATAACCAAAAGAGGAGTTCAAAAGGTTTTCAACATAACACTTCAAACCATGTTGCATCTCAATCAGATACACCTAGTTCAAATGGTTATTATAATTTCAAGAAGGATAACACGAAAGCTGGAAATAGTAACTCTCGGAGATCTTCATCTTCAGTTCCACCTACCCACAGAAGAGCTGAAACCTTTTGGACTATCTGCAATCGATGCAGGACACATTATGAATATCTGAGGATTTATTTGAATCATACCCTTTTGTGTCCCAATTGCAATGAAGCTTTTGTAGCTGTGGAGAGGGGTCCACCTCCCAATGTCTTTAAGTCACCAAATTGGTCTTCTCGACAACATCCTCAGGGTTCTCGACATCAATCTGGAAGTAATAACTCGAACTATCAGTGGAGTTCTCAATCGAGAATGGCTGGTTTTGGTAGCACAGATGGATCCTCTTCCGTTGCTGCACAAGCTGCTAGTGTTGTGCAACAGGCAAGTGAGAAGGTGAGAAGAGACGGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAACAGTCTAAGAGGAATGATGGTTCTTATTATAATTCAAAGAAGAGGAAGACTGATGATTTTCATGTTAATGGTTATCAAGGATACACGGCAAATCAAGGTCAGGTAAACTTGGAATCCGAAAGGCATTATGGTTTTTCAGGTATGACTGGCGGCAAGCCTTACAGCACAAGAGAATTGTCGATGTATGAATTAAGAAACATGTTGATGGATAAGTCACGGACTGAAATCCGTAAGAAATTACAAGAATGGAAATCAATAGCTGAAGCTAAGATTGCCAATAAGAGACAGAAAAGCCCAGTTACTGGCAAAACCAATGGTAATGGTAATAGGCATGTTGAAGTTGGTTCTTTCAAAGACCCATCTGATGATACAGTTAAGAACGCAGTCTATGTTACAATCAATGTTCCGGACCCTGATTTTCACAACTTTGACTTGGATAGAGCTGAAAATTCTTTTGACGAGGACCAGGTTTGGGCTGCGTATGATGACGATGATGGAATGCCTCGATATTATGCCAAGATTCACAAGGTGATCTCTACAAAGCCATTCAGAATGCGGATCAGTTGGCTTAACTCTCGTAGCAACAGTGAATTGGGCCCCATGGACTGGGTAGGGTCTGGTTTCTACAAAACTCTTGGGGATTTCAGAACCGGCAAGCATGAAATAACCGAATCGCTGAACTCATTCTCACACCAGGTTAAGTGGAGCAAAGGGAACAGAGGAGTTGTCCGAATCTTTCCTGGAAAAGGCGAAGTCTGGGCTCTTTATAGAAACTGGTCTCATGATTGGAATGAACACACCCCGGATGATGTGATACACAAGTATGATATGGTGGAGGTGCTCGAAGATTTCACCGAGGAGCAAGGCGTCATAGTTACCCCCCTTGTCAAGGTTTCTGGTTTCAGGACCGTGTTTAAGAGGCACCCAGACGCCAATCAGCAAAAGAGGATTCCCAAAGAGGAGTTGTTTCGATTCTCACATCAGGTTCCTAACTACTTGCTCACCGGCCAAGAAGCTGACAACGCCCCAAAGGATTGTCGAGAGTTGGATCCAGCTGCCACTCCATTAGACCTTCTTCAGATAGTATCTGGTGATGCCAACAGAGCATCACTAGATAACAATGCTTAG	2046	0.433	MMECNRDEAIRAKEIAERKFSEREYVGAKKLALKALNLYPALEDLPQFLQTIEIFISAENKISGEMDWYGILGVSPFADEETVRKQYRKLALSLHPDKNKCLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSSKGFQHNTSNHVASQSDTPSSNGYYNFKKDNTKAGNSNSRRSSSSVPPTHRRAETFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKSPNWSSRQHPQGSRHQSGSNNSNYQWSSQSRMAGFGSTDGSSSVAAQAASVVQQASEKVRRDGAPSIAEWERSQQSKRNDGSYYNSKKRKTDDFHVNGYQGYTANQGQVNLESERHYGFSGMTGGKPYSTRELSMYELRNMLMDKSRTEIRKKLQEWKSIAEAKIANKRQKSPVTGKTNGNGNRHVEVGSFKDPSDDTVKNAVYVTINVPDPDFHNFDLDRAENSFDEDQVWAAYDDDDGMPRYYAKIHKVISTKPFRMRISWLNSRSNSELGPMDWVGSGFYKTLGDFRTGKHEITESLNSFSHQVKWSKGNRGVVRIFPGKGEVWALYRNWSHDWNEHTPDDVIHKYDMVEVLEDFTEEQGVIVTPLVKVSGFRTVFKRHPDANQQKRIPKEELFRFSHQVPNYLLTGQEADNAPKDCRELDPAATPLDLLQIVSGDANRASLDNNA	681

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	403	417	-	-
	Arst8g00581	681	ProSiteProfiles	dnaJ domain profile.	67	131	IPR001623	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	129	180	-	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	288	321	-	-
	Arst8g00581	681	Pfam	DnaJ domain	67	128	IPR001623	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	230	272	-	-
	Arst8g00581	681	Gene3D	DnaJ domain	64	176	IPR036869	-
	Arst8g00581	681	PRINTS	DnaJ domain signature	103	123	IPR001623	-
	Arst8g00581	681	PRINTS	DnaJ domain signature	69	87	IPR001623	-
	Arst8g00581	681	PRINTS	DnaJ domain signature	87	102	IPR001623	-
	Arst8g00581	681	SUPERFAMILY	Chaperone J-domain	58	127	IPR036869	-
	Arst8g00581	681	CDD	DnaJ	67	120	IPR001623	-
	Arst8g00581	681	SMART	dnaj_3	66	123	IPR001623	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	132	180	-	-
	Arst8g00581	681	ProSitePatterns	Nt-dnaJ domain signature.	108	127	IPR018253	-
	Arst8g00581	681	PANTHER	BNAC03G44070D PROTEIN	2	661	-	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	400	425	-	-
	Arst8g00581	681	MobiDBLite	consensus disorder prediction	231	272	-	-
	Arst8g00581	681	Pfam	Domain of unknown function (DUF3444)	438	644	IPR024593	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g00581	Arst-Chr8	8081718	8086309	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g00581	5	227	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	31.169	1.12e-26	110

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g00581	-		-	adu:107460588	1367.44