Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00572 ATGAATTTTCAGCAAGACAAGTTTGTTAGATTTCAGGATTGGAGCTCGGAGAAGAGTTCCGAGAGCAACTATCCCACACTTAATGGAACACGATCGGGGAGAATCAGAGCCACATTTGGTTCGGTTTCAAAGAAGTTTCAAAGGGGCTTTGAGTCTAGTTCGGAAAGGATAAAGAGAATTAGGAAATCCTTCAAATCTTTGCCCTATAACAATGTTCTTGCTAAGAGTTTCAGTTCTAGAAAGAAAATCCTTGATCCGCAAGGTCCTTTCCTTCAAAGATGGAACAAGATATTTGTATTGTCTTGCCTTATTGCTGTATCACTGGATCCTTTGTTCTTCTATGTCCCCGTGATCGATGATGACAGGAAATGTCTTTCACTGGACAAAAAAATGGAAATTACAGCAACAGTTTTGAGATCTTTCTCTGATATTTTTTATATAATCCACATAATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTCTTTGGAAGAGGGGTTTTGGTTGAAGATTCTTGGGCAATAGCTATGAGGTATCTGTCATCATACTTCCTAGTTGACATTCTTGCGGTTCTTCCCCTCCCACAGGTGGTGATCCTAATTATCATTCCAAAGATGAAAGGGTTTGAATCATTGAATACAAAAAACTTGCTGAAGTTTGTGGTCTTCTTCCAATATGTGCCACGGTTCTTGAGAATAATTCCATTATATAAAGAGGTTACAAGGAGCTCTGGCATTCTAACTGAAACAGCTTGGGCTGGAGCTGCATTTAATCTGTTTCTTTACATGCTCGCAAGTCATGTTCTTGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAAATGCCTGTCGAAGAACCAAGTGTAACAAGGCAGAAATATACTGTGATGATTATCAGGGCTCAATCTCGACATTATTGAATAATTCTTGCCCGATACAGGAGCCAAATACAACACTCTTCGATTTTGGAATATTCCTTGATGCCCTTCAATCTGGCGTTGTGGCGTCAGAAGATTTCCCACAGAAATTCTTTTATTGTTTTTGGTGGGGCCTCCAGAATTTGAGTTCTCTTGGGCAGAACTTGAAAACAAGTACCTATGTATGGGAGATCTGCTTTGCAATTTTCATTTCTATTGCTGGCCTGGTACTGTTTTCATTTCTCATCGGAAATATGCAGACATATCTGCAATCAACAACAACCAGGTTGGAGGAGATGAGAGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATCGCTTACTCCCCGACAGCCTGAGAGAGAGAATCAGACGACACGAACAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAAGACAATTTGATCCGCGATCTTCCCAAGGATTTAAGAAGGGACATTAAACGTCATCTTTGCTTGGCTTTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGATGAGCAACTTTTAGATGCAATGTGTGACCGTCTCAAGCCAGTTCTGTACACAGAAGAAAGCTGCATTGTCCGCGAAGGAGATCCGGTTGACGAGATGCTCTTCATAATGCGAGGAAAGCTATTGACTGTGACAACAAATGGTGGGAGAACAGGTTTCTTTAACTCGGAATATCTAAAGGCCGGAGACTTCTGTGGAGAAGAGCTCCTCACATGGGCACTAGATCCTAATCCCTCATCCAATCTTCCCACCTCAACTAGGACCGTCCAAACTCTTTCGGAGGTGGAAGCATTCGCTCTAAAGGCCGACGACTTGAAGTTCGTTGCATCTCAATTCCGGCGACTTCACAGCAAGCAGCTTCGCCACACTTTCAGGTTCTACTCGCAGCAATGGCGCACTTGGGCTGCTTGTTTCATACAAGCGGCGTGGAGGCGTTACAGCAAACGGAAGCTGGAAGAGAGTCTTAGGGAAGACGAGAATAGGCTGCAAGATGCATTGGCCAAGGCTGGTGGTAGCTCGCCAAGTCTTGGTGCCACAATATATGCATCTAGATTCGCAGCGAATGCTCTTAGAGCTATTCGTAGAAATGGAAGAGGAACTATTTTCATTTTTCATTTTTTCTTTTTAGTCAAGTGTAAGATATAA 2106 0.4255 MNFQQDKFVRFQDWSSEKSSESNYPTLNGTRSGRIRATFGSVSKKFQRGFESSSERIKRIRKSFKSLPYNNVLAKSFSSRKKILDPQGPFLQRWNKIFVLSCLIAVSLDPLFFYVPVIDDDRKCLSLDKKMEITATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIAMRYLSSYFLVDILAVLPLPQVVILIIIPKMKGFESLNTKNLLKFVVFFQYVPRFLRIIPLYKEVTRSSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQNACRRTKCNKAEIYCDDYQGSISTLLNNSCPIQEPNTTLFDFGIFLDALQSGVVASEDFPQKFFYCFWWGLQNLSSLGQNLKTSTYVWEICFAIFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLIRDLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPNPSSNLPTSTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLREDENRLQDALAKAGGSSPSLGATIYASRFAANALRAIRRNGRGTIFIFHFFFLVKCKI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00572 701 SUPERFAMILY cAMP-binding domain-like 412 605 IPR018490 -
Arst8g00572 701 Gene3D - 97 407 - -
Arst8g00572 701 ProSiteProfiles cAMP/cGMP binding motif profile. 483 567 IPR000595 -
Arst8g00572 701 CDD CAP_ED 483 614 IPR000595 -
Arst8g00572 701 SUPERFAMILY Voltage-gated potassium channels 85 405 - -
Arst8g00572 701 Pfam Cyclic nucleotide-binding domain 504 594 IPR000595 -
Arst8g00572 701 SMART cnmp_10 483 614 IPR000595 -
Arst8g00572 701 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
Arst8g00572 701 Pfam Ion transport protein 93 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g00572 701 Coils Coil 635 655 - -
Arst8g00572 701 Gene3D Helix hairpin bin 409 474 - -
Arst8g00572 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 675 - -
Arst8g00572 701 Gene3D Jelly Rolls 481 601 IPR014710 -
Arst8g00572 701 FunFam Cyclic nucleotide-gated ion channel 1 481 599 - -
Arst8g00572 701 ProSiteProfiles IQ motif profile. 619 648 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00572 Arst-Chr8 8069665 8074539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00572 1 684 Ion Channels AT5G53130 80.523 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00572 K05391 - gmx:100817516 1221.07