Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00567 ATGGATAGTTATTTGATCTTAGTCTCCACTTTCCTCCTTGCTTGCTTTGGTGTAGTTCATGTTGTGCATGGCTCTAATACTGATACTACCTGTCCGGATTTCTTGTGCGGAAATCAAGAAATTCGGTTTCCTTTTAGAATCAAAGGCCGTCGTCAGTCACAAAGCTGTGGCTATCCGGGCTTTGATTTGGTTTGCTCAGGTACTAGTGATGATGAAGAACTGTTTCTTGAGCTCCCTGAATCATTCAATGTCATACACATTGACTATACAAAACAAACAATTGAATTAACCCCTCCATCTACCTGCCTTCCAAAGCAGCTCCATAGCCTCACTAATATCTCTGTCTTAGTTTTCCCTTTCCAGCGCATGCTAGTTGAGAAGGGTGATGACTATCACTTCTTCAACTGTTCACCAGTGGCAATGGACACATATATAAACAATGACATCATGATTCCATGCCTAAGCAGCTCAACCAGTCAAGTATATGCCATTTCATCTTGGCATTCTATCCATGACCTGACAATCCTGTTTCCTTGCACCAAAATGTTCAATATTTCATCCCTCCCAGATGCACTTGTTCCAGCTCTGAAAGATACTCTTGTTTTGTTTTGGTCTGAACCAAGCTGTCAACAATGTGAATCGGAGGGGAAAAGGTGCAGCTGGAACAACAGCACCAAGAATCAACCCGATTGTCTTGTTAATGTCATCCACAAGGGATCAGTACTTGGATCATTTTTCCTTGTCCTCTTGACCGGAGCGATTTATTACATCTATGACACTTGCATAATGCAAAAGGAAAAACAAGCAATTATTGAAAAATTTCTTGAAGATTACAGAGCCCAAAAGCCAACCAGATATTCTTATACTGAAATCAAGAGAATCACCAACAACTTTGGGTACAAGTTAGGAGAGGGCGCCTATGGAACTGTCTTCAAAGGAAGCATCTCAAAAGAATTTCCTATTGCGGTGAAAATGCTGAATAATTCCCAGGGAAATGGGGAGGAGTTTGTTAATGAAGTTGGTATAATTGGTAGAATCCACCATGTCAATATTGTCCGGTTGGTTGGTTTCTGTGCTGATGGGTTCAGAAGAGCTCTTGTCTATGAATTCTTGCCGAATTCTTCGCTGCAGAAGTTCATAAATTTGCCCGACAACAAGCAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAGATTGTTCTAGGTGTAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGATATCAAACCTCAAAATGTGTTGCTAGATCACAACTTCACTCCAAAAATTTGTGATTTTGGTCTAGCTAAATTATGTTCCAAGGATCAAAGTGTAGTGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCTGAAGTTTTCTCAAGAAACTTTGGAAATGTATCTTACAAGTCTGATGTTTACAGTTATGGAATGATGCTGCTAGAAACAATTGGAGGGAAGAAGATCACAGAGGATATAGAAGAAAACAGTAGCCATGTTTACTATCCAGAATGGATGCATAGTATTTTAGAAGAGACTGATGAAATGAGAATTCATATTGAAGATGAAGGAGATGCTAAAATTGCTAAGAAACTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAAGGAGACCAAGACACATTAGCAATACCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTGGTGTGGCTGCAAGACAAATTACCCAAGATTTAGAAGTGATCCAAGAATTAGATTGA 1836 0.402 MDSYLILVSTFLLACFGVVHVVHGSNTDTTCPDFLCGNQEIRFPFRIKGRRQSQSCGYPGFDLVCSGTSDDEELFLELPESFNVIHIDYTKQTIELTPPSTCLPKQLHSLTNISVLVFPFQRMLVEKGDDYHFFNCSPVAMDTYINNDIMIPCLSSSTSQVYAISSWHSIHDLTILFPCTKMFNISSLPDALVPALKDTLVLFWSEPSCQQCESEGKRCSWNNSTKNQPDCLVNVIHKGSVLGSFFLVLLTGAIYYIYDTCIMQKEKQAIIEKFLEDYRAQKPTRYSYTEIKRITNNFGYKLGEGAYGTVFKGSISKEFPIAVKMLNNSQGNGEEFVNEVGIIGRIHHVNIVRLVGFCADGFRRALVYEFLPNSSLQKFINLPDNKQNFLGWKKLQEIVLGVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFTPKICDFGLAKLCSKDQSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGKKITEDIEENSSHVYYPEWMHSILEETDEMRIHIEDEGDAKIAKKLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTLAIPPNPFASTGPSRKYAKIGVAARQITQDLEVIQELD 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00567 611 Gene3D Transferase(Phosphotransferase) domain 1 371 576 - -
Arst8g00567 611 FunFam S-receptor-like serine/threonine-protein kinase 263 370 - -
Arst8g00567 611 FunFam PR5-like receptor kinase 371 578 - -
Arst8g00567 611 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Arst8g00567 611 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Arst8g00567 611 ProSiteProfiles Protein kinase domain profile. 296 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00567 611 SMART serkin_6 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00567 611 SUPERFAMILY Protein kinase-like (PK-like) 279 568 IPR011009 -
Arst8g00567 611 Gene3D Phosphorylase Kinase; domain 1 269 370 - -
Arst8g00567 611 Pfam Protein kinase domain 300 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00567 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Arst8g00567 611 PANTHER RUST RESISTANCE KINASE LR10-RELATED 267 585 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00567 Arst-Chr8 8002474 8004734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00567 32 606 Receptor kinase-like Gene Family AT1G66910 34.483 4.77e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst8g00567 Pkinase 8.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00567 - - lang:109328752 759.599