Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00566 ATGTTAAACCTTTGTACATTTTTTATACACCTTCTACCGCTGCTGTGGATCTCCTTACAAGTTTTCGATTTTTATGCCACCCGGTGGAATACCAAGGTGGCAAAGGATTCAGACAAAAGAATGTGTTCATCTGAATGGTGTGGGAGGCATGACATAAGGCATCCTTTCAGGCTGAATAATAGTAGTCCAACCTATTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAGTCAATTAATTACAACAACTACACAATTCGACTAGTAGATGCCAATGTTTCCCTGCATAGCCATGATCTCTCTTACCCCCTTCCTTATTCTTTAACCCCCTCCAACTTCACCGGAGCCCAAGATGAACCATATGATGATTGGTTCTTTAAACAGCATCATTTAGTTGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTTATGCTGCTGCAACTTGCATGAATGGATCTTATGCGCTTGGGAGTACATTCTATGTCAGTGATATTCATAAAAGTCTCCAGGATTTGGGGTTCGAAGACTCGTGTCATATAGAGTGGATATATGTGACTTCATGGCCTGCTGAAATCAAACACAGAAATAATTCATGCACAGACATCCATCATATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTATAAGGCCATGCTCACTGATCATAACAAAGTCATTTGTTATAAGCCTTCACTTATACCTAAAAGTTTCCTAGACTCAATGTATGTTGAGGTTCTAATGGCTGGAACGGTTTTATTTGTTCTTGCCAAATTTGCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGGAGGCATTTATCCATATATGATAGTATCGAAGATTTTCTGCGAAGCGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGAAAAGTTCAAGACTAAATTAGGAAATGGAGGCTATGGCTCTGTTTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATGAGGCCAAGTCCAATGGTCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTTTGTGTGGAGGGATCAAAGCGTTGTTTGGTATATGAGTTAATGCAGAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGGGAGTGCTTCCTTAAGTTGTGAAAAACTCTACACCATTTCCCTTGGAGTGGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTCAATCCGAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGGATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGACGATGACTTAGAAATGCCTCTAAAACCATACTTCTACCCACTTGATGCACCCACACAAGAGAATGGTGAAGATAATACAACTCACAACAGTTCAAAATTATCCTCTGATGACATCTCTTCAGTCAGTGATTCAAAGGAATAG 1989 0.3952 MLNLCTFFIHLLPLLWISLQVFDFYATRWNTKVAKDSDKRMCSSEWCGRHDIRHPFRLNNSSPTYCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDANVSLHSHDLSYPLPYSLTPSNFTGAQDEPYDDWFFKQHHLVDVIRLTKQMVYLMRCPPYGVESSYAAATCMNGSYALGSTFYVSDIHKSLQDLGFEDSCHIEWIYVTSWPAEIKHRNNSCTDIHHMLLYGFELSWLKVYCKYKAMLTDHNKVICYKPSLIPKSFLDSMYVEVLMAGTVLFVLAKFALGAPCIIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITEKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNEAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQGSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDSDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPLKPYFYPLDAPTQENGEDNTTHNSSKLSSDDISSVSDSKE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00566 662 MobiDBLite consensus disorder prediction 635 654 - -
Arst8g00566 662 ProSiteProfiles Protein kinase domain profile. 343 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00566 662 SUPERFAMILY Protein kinase-like (PK-like) 324 614 IPR011009 -
Arst8g00566 662 Gene3D Phosphorylase Kinase; domain 1 322 417 - -
Arst8g00566 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Arst8g00566 662 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00566 662 Gene3D Transferase(Phosphotransferase) domain 1 418 624 - -
Arst8g00566 662 MobiDBLite consensus disorder prediction 624 662 - -
Arst8g00566 662 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Arst8g00566 662 CDD STKc_IRAK 349 615 - -
Arst8g00566 662 PANTHER RUST RESISTANCE KINASE LR10-RELATED 315 637 IPR045874 GO:0004672
Arst8g00566 662 FunFam PR5-like receptor kinase 418 623 - -
Arst8g00566 662 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
Arst8g00566 662 Pfam Protein kinase domain 346 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00566 662 FunFam serine/threonine-protein kinase PBS1-like 316 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00566 Arst-Chr8 7997818 8001692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00566 36 625 Receptor kinase-like Gene Family AT5G38260 36.721 9.39e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst8g00566 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00566 - - aip:107607706 1256.89