Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00564 ATGTGGAGAAACTTACATAACAATCTTCAGTTTATTGTAACCAAGGAAGAAATGAAACCTGTCATGGTGGTGTGGGTGTGGGTGTTGGCCTTACTCCTATCTTGTGGAAACGGTTACAGCAGAGTAACGGATTCTGTTACGTGTTCCAGTCAGTGGTGCGGAACGCATAACATAAGCTATCCATTCACACTAACTAACACTCCACCTAACTGCGGTGATCCCACCTTCAACAACACGCTCTCTTGCGACAATCATAACCAACTCTTTCTTTACTTCAAATCACGAAAATTCTATGTTCAGTCTATTAATTACAACAACTCCACACTCCGATTAGTAGATTCCACCATTATTAACAACTCTTCTTATTTTCTGGCCTCCTATAATTTCAACTCTTACAAATCATATCAACACCATCACAAGCAGATTCTATACGTGACGTGTCCAAACGCGGTGGGATCCGAAGTTGATGACCCTGCTGCTGCAACTTGCATCAACGGTTCTTACGCGCCTGGAAGCAGCAGCTTCCATGTCTATGATGGTAACAAGACTTTGCAAGAGTTGGGACTGCAAGACACGTGTCGCGTAGAGTGGATGTATCCAAGTTCGTGGCCGGGTGAAATCGACGGTGGAAACATCTCTTGCGTAGATCTCCGTACAATGCTGCTTTACGGGTTTGAAATTCCCTGGGCCTTGTGTTTTTGCCAACATGCTGTCTTGGATGATCAAAATAACAACCTTCGTTGTTTAAGTCAACACTCACCCACTCCTTTAGTTGAAGTCATTGGAGACTGGATATACTATATAATATTTTTCTTGGTTGGCAAATTCATGCTTGGAATTGCATTCGTCATCTTCTGCGAATGGCGACAGAAGAATTTAGGCACGTATTACACCATTGAAGATTTTCTGCGAAATAACAATGAAATATTGCCATTTAGATACTCTTACAAAGACATCAAGAACATAACCAACGGATTCAAAACAAAACTGGGAAATGGAGGCTATGGCTCTGTCTTTCAAGGAAAACTTCCAAGTGGTCGTCTTGTAGCTGTCAAAGTGTTGAATAACACTAACACCAGATCGAATGAAGAAGAATTTATCAGTGAAGTTGCTACTATTGGTAGAATTTACCATGTCAATGTAGTGCAACTCATTGGTTTCTGTGTGGAAGGACTAACACGTGCTCTTATATATGAGTTAATGGAAAATGGGTCTCTAGAAAAGTACATATTTTCACATGAAAAAGGTGTTTTCTTAACTTGTGAAAAATTGTACAAAATTTCCCTTGGGGTGGCACGTGGCATCGAGTTCATGCATAATGGTTGCGACATGAAGATTCTGCATTTTGATATCAAGCCTCAAAACATTCTTCTTGATGAGAATTTCAATCCGAAAGTCTCTGATTTCGGACTTGCAAAGCTATGTCCCACTAGTGATAGCAAAGTGTCTTTGACTGCAGCAAGAGGAACTATAGGATACATGGCTCCTGAGCTTTTCTACAGAAACATTGGAACAATTTCCGATAAAGCTGATGTCTATAGTTTTGGAATGTTGTTAATGGAGATGGCAAGTAGGAAAAAGAATCTGAATACATCGGCTAAAAATTCTAGCCAACTTTATTTCCCTTTCTGGGTTTATAATCAGTTACATGATGGAAGTGAAATTGTAATTGAAAATGACACAGATGAGGAGATGAAGTTGGCCAAAAAGATGATGATTGTGGCATTATGGTGTATACAAACAAAGCCTAGTGATCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGATGATGAAGAATTGGAAATATCTCCTAAGCCTTACATATATTCACATGATATACCTGCACAAGATGTTGGAGATTTTAGCACTTCAATGCTATTCTCTGATGTATCATCAGTTAGTAATTCTAAAAAAATTGTGTATTCCCCTTAG 1941 0.3946 MWRNLHNNLQFIVTKEEMKPVMVVWVWVLALLLSCGNGYSRVTDSVTCSSQWCGTHNISYPFTLTNTPPNCGDPTFNNTLSCDNHNQLFLYFKSRKFYVQSINYNNSTLRLVDSTIINNSSYFLASYNFNSYKSYQHHHKQILYVTCPNAVGSEVDDPAAATCINGSYAPGSSSFHVYDGNKTLQELGLQDTCRVEWMYPSSWPGEIDGGNISCVDLRTMLLYGFEIPWALCFCQHAVLDDQNNNLRCLSQHSPTPLVEVIGDWIYYIIFFLVGKFMLGIAFVIFCEWRQKNLGTYYTIEDFLRNNNEILPFRYSYKDIKNITNGFKTKLGNGGYGSVFQGKLPSGRLVAVKVLNNTNTRSNEEEFISEVATIGRIYHVNVVQLIGFCVEGLTRALIYELMENGSLEKYIFSHEKGVFLTCEKLYKISLGVARGIEFMHNGCDMKILHFDIKPQNILLDENFNPKVSDFGLAKLCPTSDSKVSLTAARGTIGYMAPELFYRNIGTISDKADVYSFGMLLMEMASRKKNLNTSAKNSSQLYFPFWVYNQLHDGSEIVIENDTDEEMKLAKKMMIVALWCIQTKPSDRPSMKRVVEMLEQDDEELEISPKPYIYSHDIPAQDVGDFSTSMLFSDVSSVSNSKKIVYSP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00564 646 Gene3D Transferase(Phosphotransferase) domain 1 401 609 - -
Arst8g00564 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Arst8g00564 646 FunFam PR5-like receptor kinase 401 607 - -
Arst8g00564 646 FunFam serine/threonine-protein kinase PBS1-like 298 400 - -
Arst8g00564 646 SMART serkin_6 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00564 646 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Arst8g00564 646 ProSiteProfiles Protein kinase domain profile. 324 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00564 646 SUPERFAMILY Protein kinase-like (PK-like) 306 597 IPR011009 -
Arst8g00564 646 Gene3D Phosphorylase Kinase; domain 1 304 400 - -
Arst8g00564 646 Pfam Wall-associated receptor kinase galacturonan-binding 48 113 IPR025287 GO:0030247
Arst8g00564 646 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Arst8g00564 646 Pfam Protein kinase domain 327 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00564 646 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 616 IPR045874 GO:0004672
Arst8g00564 646 CDD STKc_IRAK 330 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00564 Arst-Chr8 7971253 7973935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00564 26 625 Receptor kinase-like Gene Family AT5G38260 36.624 5.27e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst8g00564 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00564 - - adu:107460529 1313.9