Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00562 ATGTTATCCCTTTGTTCATTTTTGGTACCCCTTCTACTGCTGCTGGGGATCTCCTCATACGTTTTCAATAATATTTATGACTCCCGGTGGGATAGCGAGGTGGCAATTGATGCAAATAAAACAATGTGTTCATCCGGGTGGTGTGGGAGGCATGACATAAGGTACCCGTTCAGGCTGAATAATAGTAGTCCAAGCCACTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAGTCAATTAACTATAACAACTACACAATTCGACTAGTTGACGTCAATGTTCCCCTGCATACCCATAATCACTCTTCTCTCCCTAGTTATTCTTTGACCTCCTCCAACTTCACCAGAGATGATCCATATCAATATTGGTTCTATACACAGCATTTTAACGATGTTATTACATTAACAAAGCAGATGGTATATTTGATGAGGTACCCACCATATGGAGTAGAATCTTCTACTGCTGTTGCAAATTGCATGAATGGATCCTATGCACTTGGGAGTACATTCTATGTCAGTGATCTTGACAAGCGTCTCCAGGATTTGGCGTTCAGAGACTCATGTCATATAGATTGGATGTATTTGACTTCATGGCCTACTGAAATCAAGCAGATCAACATTTCATGCACAGACATCCATCATTTGCTGCTCTACGGGTTTGAACTTTCTTGGATGAAAGGATATTGCTATAATGACACAGACTTTGCCATTCTCGGTGATCATAACAACATCGTTTGTTATAACAATCATTACGAAAGATCTCCATTTGAAAATTATGTACTTTCATGGATTGTTATTTGTCTAATGAATGGAACGATATTATTTTTACTTGGCAAATTTGGACTTGGAGCTTTGTTCATCGTTATCTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATATGACAGTATTGAAGATTTTCTGCGAAGTGACAATAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTTTTTCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGGGAGTGCTTCCTTAAGTTGTGAAAAACTCTACACCATTTCCCTTGGAGTGGCACGTGGTATTGAATACTTGCATAATGGCTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAGAACTTCAATCCGAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGATTCAGATGAAGAGATGAAGTTGGCAAAAAGGATGATGATTGTGGCATTGTGGTGTATACAAACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTTGAACAAGACGATGACTTAGAAATGCCTCTAAAACCATACTTCTACCCACTTGATGCACCCACACAAGAGAATGGTGAAGATAATACAACTCACAACAGTTCAAAATTATCCTCTGATGACATCTCTTCAGTCAGTGATTCAAAGGAATAG 2001 0.3928 MLSLCSFLVPLLLLLGISSYVFNNIYDSRWDSEVAIDANKTMCSSGWCGRHDIRYPFRLNNSSPSHCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDVNVPLHTHNHSSLPSYSLTSSNFTRDDPYQYWFYTQHFNDVITLTKQMVYLMRYPPYGVESSTAVANCMNGSYALGSTFYVSDLDKRLQDLAFRDSCHIDWMYLTSWPTEIKQINISCTDIHHLLLYGFELSWMKGYCYNDTDFAILGDHNNIVCYNNHYERSPFENYVLSWIVICLMNGTILFLLGKFGLGALFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQGSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDSDEEMKLAKRMMIVALWCIQTKPNDRPSMKRVVEMLEQDDDLEMPLKPYFYPLDAPTQENGEDNTTHNSSKLSSDDISSVSDSKE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00562 666 PANTHER RUST RESISTANCE KINASE LR10-RELATED 319 641 IPR045874 GO:0004672
Arst8g00562 666 FunFam PR5-like receptor kinase 422 627 - -
Arst8g00562 666 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Arst8g00562 666 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00562 666 CDD STKc_IRAK 353 619 - -
Arst8g00562 666 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00562 666 MobiDBLite consensus disorder prediction 639 658 - -
Arst8g00562 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Arst8g00562 666 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Arst8g00562 666 ProSiteProfiles Protein kinase domain profile. 347 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00562 666 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
Arst8g00562 666 FunFam serine/threonine-protein kinase PBS1-like 319 421 - -
Arst8g00562 666 MobiDBLite consensus disorder prediction 628 666 - -
Arst8g00562 666 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
Arst8g00562 666 Gene3D Transferase(Phosphotransferase) domain 1 422 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00562 Arst-Chr8 7956468 8001701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00562 34 629 Receptor kinase-like Gene Family AT5G38260 36.809 1.09e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst8g00562 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00562 - - aip:107607706 1066.6