Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00561 ATGTTATATTTGAAGTGCCCACCATATGGAGTAAAATCTTCTGCTACTGCTGCTGCAACAACCTGCATGAATGGATCTTATGCGCTTGGGAGTACATTCTATGTCAGTGATATTGACAAACCTCTCCAGGATTTGGCATTCGGAGACTTGTGTCAGGTAGAGTGGATGTATCTGACTTCATGGCCTACTGAAATCAAACACACAAATATTTCATGCACAGACAACCATCATATGTTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGCATATTGCAAGAATGATGATCCAGGATATGCCATGCTCAGTGATCATAAAGTCATTTGTTATAAGCCTCCACTTATGCCGAAAATTTTCCTAGTTCCACTGATTGTTGGGTGTCTGGTGTATGGAACGATTTTATTTTTTCTTGGCAAATTTGGACTTGGAGTTCTATTCATCGTTATTTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATACGATAGTATTGAAGATTTTCTGCGAAGTGACAACAACATCATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTGGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATAAATGAAGTTGCTACTATTGGAAGAATTCATCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGAACAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCCTTAGAAAAATACATATTTTCACCTCAAGAGAGTGCTTCAAATTCCTTAAGTTGTGAAAAACTGTACAATATTTCTCTTGGAGTGGCACGTGGTATTGAGTATCTGCATAATGGTTGTGACATTAAAATTTTGCACTTTGACATTAAGCCTCATAACATTCTTTTGGATGAGAAATTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTTTATCCCACTGATAAAAGCATTGTGTCTCTGACCGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTATAGAAACGTTGGCACAATCTCATACAAAGCAGATGTTTATAGCTTTGGGATGTTGTTGATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCTTTGACTGAAAATTCCAGCCAAATTTATTTTCCTTTCTGGGTTTATGATCAATTACAAGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAGAAAATGATGATTGTGGCATTGTGGTGTATACATACAAAGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGAAGACTTACTAGAAATGCCTCCTAAGCCTTACTTCTATCCACTTGATGAACCTGCAGACGAAGTCAGAGAAGAAAACAGTTCAAGGCTATTCTCTGTTATCTCATCAGTTACTGGTTCCAAAGAATAA 1527 0.3838 MLYLKCPPYGVKSSATAAATTCMNGSYALGSTFYVSDIDKPLQDLAFGDLCQVEWMYLTSWPTEIKHTNISCTDNHHMLLYGFELSWLKAYCKNDDPGYAMLSDHKVICYKPPLMPKIFLVPLIVGCLVYGTILFFLGKFGLGVLFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGTKRCLVYELMQNGSLEKYIFSPQESASNSLSCEKLYNISLGVARGIEYLHNGCDIKILHFDIKPHNILLDEKFNPKVSDFGLARLYPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNALTENSSQIYFPFWVYDQLQDGREITIENDTDEEMKLAKKMMIVALWCIHTKPNDRPSMKRVVEMLEQDEDLLEMPPKPYFYPLDEPADEVREENSSRLFSVISSVTGSKE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00561 508 PANTHER RUST RESISTANCE KINASE LR10-RELATED 163 485 IPR045874 GO:0004672
Arst8g00561 508 FunFam PR5-like receptor kinase 266 475 - -
Arst8g00561 508 Gene3D Phosphorylase Kinase; domain 1 170 265 - -
Arst8g00561 508 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Arst8g00561 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Arst8g00561 508 SMART serkin_6 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00561 508 ProSiteProfiles Protein kinase domain profile. 191 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00561 508 SUPERFAMILY Protein kinase-like (PK-like) 172 464 IPR011009 -
Arst8g00561 508 FunFam serine/threonine-protein kinase PBS1-like 163 265 - -
Arst8g00561 508 Pfam Protein kinase domain 194 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00561 508 Gene3D Transferase(Phosphotransferase) domain 1 266 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00561 Arst-Chr8 7956459 7971175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00561 138 493 Receptor kinase-like Gene Family AT5G38260 46.739 8.95e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst8g00561 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00561 - - aip:107607706 808.52