Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00538 ATGCTGATTGAAATTGAACTAAGCTTGAACAAATCGATGTTGGCAGCATGCATTAAATGCTATAGTCCATTCCTTAAGAGTGATCCTGTTCAATCTTCTGTCATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCCCCGGAACCTGTTTTTGAAGAGTCATTCATGAACCTGGATCCTGTGACAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCTGCTGATATTGATGTTCTTCAAAAGGAACAGCTTCTGAGTGATGTGTTTTATGAGTGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGACTTGCCGTTCTCCGATATTCTGGAAATCAAAGTTCCTGTTCTTAACACAGAGGAGAACTCAATTGAAGAAAAGAAACAATTTCTAGACATGCCACCATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGCTACAATGAAGCCTGCTTTCCTCGATGTCCCAGGAATAGATTTCGATGAAGTTTATGGCATGAGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGTAATGGCAATCTGAACATAGTCCAGTCTCCCCACGAGAGGCGTTTGCTTATCGGCAGTAGCATCAAAGAGGAACGCCAAGAGAAGCTATCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCTAGAATCCGTGGAAGATTTGCGAAGACCGAAGAATATGATACCAAGAGGCAATGA 822 0.4246 MLIEIELSLNKSMLAACIKCYSPFLKSDPVQSSVMSEYDLAAEGDLFKAPEPVFEESFMNLDPVTAAISMISCGEDVSSQGLKSADIDVLQKEQLLSDVFYECEKDLLEKAAIDLPFSDILEIKVPVLNTEENSIEEKKQFLDMPPLPKSVSSGSLSSMDWMHGATMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPHERRLLIGSSIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00538 273 ProSiteProfiles CCT domain profile. 223 265 IPR010402 GO:0005515
Arst8g00538 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 152 265 IPR045281 GO:0009909
Arst8g00538 273 Pfam CCT motif 223 265 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00538 Arst-Chr8 7592884 7595311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00538 218 269 C2C2-CO-like Transcription Factor Family AT3G21880 49.057 1.79e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst8g00538 CCT 1.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00538 - - gmx:100814332 379.022