Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00516 ATGGGGATTTCACCTATGGATGATTTCGACGATTGGGCGCCATTGTTAACCTACAAAAGCACGCAGAAGCTTTTCTTGACCGACTTGCCAGAAGTGGATAACGACTTCGACGACCTTCCACCTCTGGACGATTTCAAGAAAGAGAGCGAGGAAGAGGATCAAGAACACAAGCAGTTACTACAACTTGTTCCGAGTAGTAGTACGATTAAGAACAAGAAGAGTGAGTTGGAATACGATGAGATTAAGAAACACTTCCATTTGCCAATCACAGAAGCTGCTAGTAAGATGAACATTGGTTTGACATTGTTGAAGAGAAGGTGCAGAGAACTCAGCATCAAGCGTTGGCCTCATAGGAAAATCAAGAGCTTGCATTTACTCATACAAACTCTCAAGGAGACAGGTTTGGACAATGAAGTTGAAATGTTGGAGGAAGAAATAAACATGTTGAAGCAAGTTCCAGAGACGGAAATCACACAAGAGACCAAGAAACTAAGGCAGGCTTATTTTAAAGCCAATTACAAAAGGAGGAAACTTTTGGCCTCTAACTCTTCTTGA 555 0.418 MGISPMDDFDDWAPLLTYKSTQKLFLTDLPEVDNDFDDLPPLDDFKKESEEEDQEHKQLLQLVPSSSTIKNKKSELEYDEIKKHFHLPITEAASKMNIGLTLLKRRCRELSIKRWPHRKIKSLHLLIQTLKETGLDNEVEMLEEEINMLKQVPETEITQETKKLRQAYFKANYKRRKLLASNSS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00516 184 MobiDBLite consensus disorder prediction 31 57 - -
Arst8g00516 184 Pfam RWP-RK domain 76 123 IPR003035 -
Arst8g00516 184 MobiDBLite consensus disorder prediction 39 57 - -
Arst8g00516 184 Coils Coil 132 152 - -
Arst8g00516 184 ProSiteProfiles RWP-RK domain profile. 65 145 IPR003035 -
Arst8g00516 184 Coils Coil 42 62 - -
Arst8g00516 184 PANTHER PROTEIN RKD4 66 183 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00516 Arst-Chr8 7288754 7289382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00516 73 180 AtRKD Transcription Factor Family AT5G53040 56.481 1.15e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst8g00516 RWP-RK 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00516 - - adu:107460461 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00516 8 7288754 7289382 Arst8g00516 8 7288754 7289382 ECH