Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00498 ATGAAGAAGATGGGACTGAGTGTGAATGGGATTGAGAATTCAGTGGATGTGGTTGGTGTTGTTGAGCAGGAAGAGGTGAGGGATAGAGTGGAGTATAGTAGTGGGGCTGTGACTAGAACTTGTGATGGTTTTGAAGAGGAGTTCTGTTCGAGTCGGTCATCTATGTCTTGTTTTTCCAGTATTGATTCTTCAAAGGAGTATGGTTTGGAGGAGAACTTGCTGTGCCAAGACAAGAATTCAGACAAGAGAGTTGAGTGTAATGTGGATCCAAAGGGGGAACAGAGGAATATGAGGGATGGTAGGGATGTGGTTCTGGATCGGTTGGCGAATACAGGGGAACCTGATGATTCTGAGAAACCCTCTGGGGTAACTCCTTCTTGGCAGACGAATGGGAATAAAAGGAGTTGGCTCAGAAGATTGCGGTCGTTTACATGTATGCTTGATAATCAAGGTGACAATGGTTTTGGCTCAGGATGTAAGCTTCAGAGAGTTAAGGTTCGGCAATGCAAGAAGCAAATGAAGGAATTGTCTGCTCTTTACATGAGACAAGATATCAAAGCGCATGAAGGTTCTATTACGACAATGAAATTCAGTCCTGATGGCCAGTATCTTGCAAGTGGCAGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGATTGAGGAGGATATGTCTAATGAAATTGACATTTCAGAAATTGACCCATCCTCCCTTTACTTTACAGTGAATAATCTCTCTGAATTGAAACCTCTGTTTATGGACAAGGAGAAAATCAACAAACTGAAGAGCATGAGAAAAACACAAGATTCAGCATGTATCATTTTCCCTCCTAAGATCTTCAGGTTGTTGGAGAAACCGTTGCATGAGTTCTATGGGCATAGAGGTGAAGTATTGGATCTCTCCTGGTCAAAGAATAATTATCTTCTCTCGTCATCCGTTGACAAAACTGTCCGTCTGTGGCAAGTGAAATCCGATAATTGCTTGAAAGTTTTCCCACACAGTAATTATGTGACATGCGTACAATTCAATCCCGTAGATGATAATTATTTCATTAGTGGATCTATAGATGGAAAAGTGCGCATCTGGACGATTCCTGATTGTCGTGTCATAGATTGGACCGACATTAGAGATATAGTAACGGCAGTATGTTATCGACCCGATGGCCAGGGAGGGATTATTGGGTCCATGGCAGGAAATTGTCGATTTTATAATGTATCAGATAATCAGTTGCAGTTGGATTCCCAACTATGTTTACTTGCTAAAAAGAAATTTACTGGAAGAGGGATAACAGGCTTTCAGTTTTTTCCACAAGATTGTAACAAAGTTATGGTTACCTGTGCGGATTCACAAGTCAGAATCCTTGACGGGCTTAATGTGATTGGCAAATACAAGAGCGTAGGCACAGGGAGCCCAATGAGTGCATCTTTCACTTCTGATGGCAAACATATATTATCAGCATCCGAGGATTCTAATGTATATATGTGGAATGTTAGTCAGGAGGAGTCTATTCCCATGAAAGCTAAGAAGATTTGGTCTTCTGAGCGGTTTTTCTCAAACGCTTCCATTGCAGTGCCTTGGCAAGGTTTGAAACCTCAGACCATGGAAAATGAACACCAATGGAATGTCCTAGATAAAACTTCACCCGAATCTGTACATCTTAACCCACCTGCTTCATTCTCCCTGGGTCAAGAGTATTTCTTGGAGGCTTTGCCTAAGGGATCTGCAACTTGGCCAGAGGAGAAGCTTCCAATTTCTAGCTCCAAGGCAAAAACGTCTACAATGCTTAAATCCGAGTACAGGTTCTTGAAATCTTCATGCAGGAGTACCTCTCGTTCTCATGCATGGGGGATGGTCATTGTGACTGCAGGCTGGGACGGTCGGATAAAGACATTCCACAATTACGGATTACCCGTACCCGTTTGA 1920 0.4271 MKKMGLSVNGIENSVDVVGVVEQEEVRDRVEYSSGAVTRTCDGFEEEFCSSRSSMSCFSSIDSSKEYGLEENLLCQDKNSDKRVECNVDPKGEQRNMRDGRDVVLDRLANTGEPDDSEKPSGVTPSWQTNGNKRSWLRRLRSFTCMLDNQGDNGFGSGCKLQRVKVRQCKKQMKELSALYMRQDIKAHEGSITTMKFSPDGQYLASGSEDGVVRLWQVIEEDMSNEIDISEIDPSSLYFTVNNLSELKPLFMDKEKINKLKSMRKTQDSACIIFPPKIFRLLEKPLHEFYGHRGEVLDLSWSKNNYLLSSSVDKTVRLWQVKSDNCLKVFPHSNYVTCVQFNPVDDNYFISGSIDGKVRIWTIPDCRVIDWTDIRDIVTAVCYRPDGQGGIIGSMAGNCRFYNVSDNQLQLDSQLCLLAKKKFTGRGITGFQFFPQDCNKVMVTCADSQVRILDGLNVIGKYKSVGTGSPMSASFTSDGKHILSASEDSNVYMWNVSQEESIPMKAKKIWSSERFFSNASIAVPWQGLKPQTMENEHQWNVLDKTSPESVHLNPPASFSLGQEYFLEALPKGSATWPEEKLPISSSKAKTSTMLKSEYRFLKSSCRSTSRSHAWGMVIVTAGWDGRIKTFHNYGLPVPV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats profile. 472 504 IPR001680 GO:0005515
Arst8g00498 639 Gene3D - 423 632 IPR015943 GO:0005515
Arst8g00498 639 ProSitePatterns Trp-Asp (WD) repeats signature. 482 496 IPR019775 -
Arst8g00498 639 SMART WD40_4 414 454 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 323 362 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 591 631 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 282 320 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 364 403 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 178 217 IPR001680 GO:0005515
Arst8g00498 639 SMART WD40_4 455 495 IPR001680 GO:0005515
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats profile. 289 329 IPR001680 GO:0005515
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 185 218 - -
Arst8g00498 639 PANTHER WD REPEAT DOMAIN 44 51 636 IPR040324 -
Arst8g00498 639 SUPERFAMILY WD40 repeat-like 180 629 IPR036322 GO:0005515
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 289 323 - -
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats profile. 329 363 IPR001680 GO:0005515
Arst8g00498 639 Pfam WD domain, G-beta repeat 185 216 IPR001680 GO:0005515
Arst8g00498 639 Pfam WD domain, G-beta repeat 284 319 IPR001680 GO:0005515
Arst8g00498 639 Pfam WD domain, G-beta repeat 325 361 IPR001680 GO:0005515
Arst8g00498 639 Gene3D - 165 422 IPR015943 GO:0005515
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 329 363 - -
Arst8g00498 639 PRINTS G protein beta WD-40 repeat signature 307 321 IPR020472 -
Arst8g00498 639 PRINTS G protein beta WD-40 repeat signature 204 218 IPR020472 -
Arst8g00498 639 PRINTS G protein beta WD-40 repeat signature 349 363 IPR020472 -
Arst8g00498 639 MobiDBLite consensus disorder prediction 110 130 - -
Arst8g00498 639 ProSiteProfiles Trp-Asp (WD) repeats profile. 185 226 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00498 Arst-Chr8 7156291 7160979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00498 281 492 U-box Gene Family AT2G33340 25.991 2.30e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00498 - - gmx:100817209 922.154