Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g00498 | ATGAAGAAGATGGGACTGAGTGTGAATGGGATTGAGAATTCAGTGGATGTGGTTGGTGTTGTTGAGCAGGAAGAGGTGAGGGATAGAGTGGAGTATAGTAGTGGGGCTGTGACTAGAACTTGTGATGGTTTTGAAGAGGAGTTCTGTTCGAGTCGGTCATCTATGTCTTGTTTTTCCAGTATTGATTCTTCAAAGGAGTATGGTTTGGAGGAGAACTTGCTGTGCCAAGACAAGAATTCAGACAAGAGAGTTGAGTGTAATGTGGATCCAAAGGGGGAACAGAGGAATATGAGGGATGGTAGGGATGTGGTTCTGGATCGGTTGGCGAATACAGGGGAACCTGATGATTCTGAGAAACCCTCTGGGGTAACTCCTTCTTGGCAGACGAATGGGAATAAAAGGAGTTGGCTCAGAAGATTGCGGTCGTTTACATGTATGCTTGATAATCAAGGTGACAATGGTTTTGGCTCAGGATGTAAGCTTCAGAGAGTTAAGGTTCGGCAATGCAAGAAGCAAATGAAGGAATTGTCTGCTCTTTACATGAGACAAGATATCAAAGCGCATGAAGGTTCTATTACGACAATGAAATTCAGTCCTGATGGCCAGTATCTTGCAAGTGGCAGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGATTGAGGAGGATATGTCTAATGAAATTGACATTTCAGAAATTGACCCATCCTCCCTTTACTTTACAGTGAATAATCTCTCTGAATTGAAACCTCTGTTTATGGACAAGGAGAAAATCAACAAACTGAAGAGCATGAGAAAAACACAAGATTCAGCATGTATCATTTTCCCTCCTAAGATCTTCAGGTTGTTGGAGAAACCGTTGCATGAGTTCTATGGGCATAGAGGTGAAGTATTGGATCTCTCCTGGTCAAAGAATAATTATCTTCTCTCGTCATCCGTTGACAAAACTGTCCGTCTGTGGCAAGTGAAATCCGATAATTGCTTGAAAGTTTTCCCACACAGTAATTATGTGACATGCGTACAATTCAATCCCGTAGATGATAATTATTTCATTAGTGGATCTATAGATGGAAAAGTGCGCATCTGGACGATTCCTGATTGTCGTGTCATAGATTGGACCGACATTAGAGATATAGTAACGGCAGTATGTTATCGACCCGATGGCCAGGGAGGGATTATTGGGTCCATGGCAGGAAATTGTCGATTTTATAATGTATCAGATAATCAGTTGCAGTTGGATTCCCAACTATGTTTACTTGCTAAAAAGAAATTTACTGGAAGAGGGATAACAGGCTTTCAGTTTTTTCCACAAGATTGTAACAAAGTTATGGTTACCTGTGCGGATTCACAAGTCAGAATCCTTGACGGGCTTAATGTGATTGGCAAATACAAGAGCGTAGGCACAGGGAGCCCAATGAGTGCATCTTTCACTTCTGATGGCAAACATATATTATCAGCATCCGAGGATTCTAATGTATATATGTGGAATGTTAGTCAGGAGGAGTCTATTCCCATGAAAGCTAAGAAGATTTGGTCTTCTGAGCGGTTTTTCTCAAACGCTTCCATTGCAGTGCCTTGGCAAGGTTTGAAACCTCAGACCATGGAAAATGAACACCAATGGAATGTCCTAGATAAAACTTCACCCGAATCTGTACATCTTAACCCACCTGCTTCATTCTCCCTGGGTCAAGAGTATTTCTTGGAGGCTTTGCCTAAGGGATCTGCAACTTGGCCAGAGGAGAAGCTTCCAATTTCTAGCTCCAAGGCAAAAACGTCTACAATGCTTAAATCCGAGTACAGGTTCTTGAAATCTTCATGCAGGAGTACCTCTCGTTCTCATGCATGGGGGATGGTCATTGTGACTGCAGGCTGGGACGGTCGGATAAAGACATTCCACAATTACGGATTACCCGTACCCGTTTGA | 1920 | 0.4271 | MKKMGLSVNGIENSVDVVGVVEQEEVRDRVEYSSGAVTRTCDGFEEEFCSSRSSMSCFSSIDSSKEYGLEENLLCQDKNSDKRVECNVDPKGEQRNMRDGRDVVLDRLANTGEPDDSEKPSGVTPSWQTNGNKRSWLRRLRSFTCMLDNQGDNGFGSGCKLQRVKVRQCKKQMKELSALYMRQDIKAHEGSITTMKFSPDGQYLASGSEDGVVRLWQVIEEDMSNEIDISEIDPSSLYFTVNNLSELKPLFMDKEKINKLKSMRKTQDSACIIFPPKIFRLLEKPLHEFYGHRGEVLDLSWSKNNYLLSSSVDKTVRLWQVKSDNCLKVFPHSNYVTCVQFNPVDDNYFISGSIDGKVRIWTIPDCRVIDWTDIRDIVTAVCYRPDGQGGIIGSMAGNCRFYNVSDNQLQLDSQLCLLAKKKFTGRGITGFQFFPQDCNKVMVTCADSQVRILDGLNVIGKYKSVGTGSPMSASFTSDGKHILSASEDSNVYMWNVSQEESIPMKAKKIWSSERFFSNASIAVPWQGLKPQTMENEHQWNVLDKTSPESVHLNPPASFSLGQEYFLEALPKGSATWPEEKLPISSSKAKTSTMLKSEYRFLKSSCRSTSRSHAWGMVIVTAGWDGRIKTFHNYGLPVPV | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 472 | 504 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | Gene3D | - | 423 | 632 | IPR015943 | GO:0005515 | |
Arst8g00498 | 639 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 482 | 496 | IPR019775 | - | |
Arst8g00498 | 639 | SMART | WD40_4 | 414 | 454 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 323 | 362 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 591 | 631 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 282 | 320 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 364 | 403 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 178 | 217 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | SMART | WD40_4 | 455 | 495 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 289 | 329 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 185 | 218 | - | - | |
Arst8g00498 | 639 | PANTHER | WD REPEAT DOMAIN 44 | 51 | 636 | IPR040324 | - | |
Arst8g00498 | 639 | SUPERFAMILY | WD40 repeat-like | 180 | 629 | IPR036322 | GO:0005515 | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 289 | 323 | - | - | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 329 | 363 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | Pfam | WD domain, G-beta repeat | 185 | 216 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | Pfam | WD domain, G-beta repeat | 284 | 319 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | Pfam | WD domain, G-beta repeat | 325 | 361 | IPR001680 | GO:0005515 | |
Arst8g00498 | 639 | Gene3D | - | 165 | 422 | IPR015943 | GO:0005515 | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 329 | 363 | - | - | |
Arst8g00498 | 639 | PRINTS | G protein beta WD-40 repeat signature | 307 | 321 | IPR020472 | - | |
Arst8g00498 | 639 | PRINTS | G protein beta WD-40 repeat signature | 204 | 218 | IPR020472 | - | |
Arst8g00498 | 639 | PRINTS | G protein beta WD-40 repeat signature | 349 | 363 | IPR020472 | - | |
Arst8g00498 | 639 | MobiDBLite | consensus disorder prediction | 110 | 130 | - | - | |
Arst8g00498 | 639 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 185 | 226 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g00498 | Arst-Chr8 | 7156291 | 7160979 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g00498 | 281 | 492 | U-box Gene Family | AT2G33340 | 25.991 | 2.30e-06 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g00498 | - | - | gmx:100817209 | 922.154 |