Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00497 ATGGGTAGCTTTAGCGAATTCGAAGAATGTCGGTTTTTTGATGCTCAAGAAGATGTTGTGTCCATTGCAGATTCAGTATCTGATGGAACTGACACCCTTGACATCAAATCTACTTCCAATGGAAGAATAGGATTGGAGGGCTTTGACTATGATGTGTGGATTCGGAGCCCGAGGAGTGTTCGAGAGCGTAGGGGCAAGTTTATGAAGAAGATGGGACTGAGTGTGAATGGGATTGAGAATTCAGTGGATGTGGTTGGTGTTGTTGAGCAGGAAGAGGTGAGGGATAGAGTGGAGTATAGTAGTGGGGCTGTGACTAGAACTTGTGATGGTTTTGAAGAGGAGTTCTGTTCGAGTCGGTCATCTATGTCTTGTTTTTCCAGTATTGATTCTTCAAAGGAGTATGGTTTGGAGGAGAACTTGCTGTGCCAAGACAAGAATTCAGACAAGAGAGTTGAGTGTAATGTGGATCCAAAGGGGGAACAGAGGAATATGAGGGATGGTAGGGATGTGGTTCTGGATCGGTTGGCGAATACAGGGGAACCTGATGATTCTGAGAAACCCTCTGGGGTAACTCCTTCTTGGCAGACGAATGGGAATAAAAGGAGTTGGCTCAGAAGATTGCGGTCGTTTACATGTATGCTTGATAATCAAGGTGACAATGGTTTTGGCTCAGGATGTAAGCTTCAGAGAGTTAAGGTTCGGCAATGCAAGAAGCAAATGAAGGAATTGTCTGCTCTTTACATGAGACAAGATATCAAAGCGCATGAAGGTTCTATTACGACAATGAAATTCAGTCCTGATGGCCAGTATCTTGCAAGTGGCAGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGATTGAGGAGGATATGTCTAATGAAATTGACATTTCAGAAATTGACCCATCCTCCCTTTACTTTACAGTGAATAATCTCTCTGAATTGAAACCTCTGTTTATGGACAAGGAGAAAATCAACAAACTGAAGAGCATGAGAAAAACACAAGATTCAGCATGTATCATTTTCCCTCCTAAGATCTTCAGGTTGTTGGAGAAACCGTTGCATGAGTTCTATGGGCATAGAGGTGAAGTATTGGATCTCTCCTGGTCAAAGAATAATTATCTTCTCTCGTCATCCGTTGACAAAACTGTCCGTCTGTGGCAAGTGAAATCCGATAATTGCTTGAAAGTTTTCCCACACAGTAATTATGTGACATGCGTACAATTCAATCCCGTAGATGATAATTATTTCATTAGTGGATCTATAGATGGAAAAGTGCGCATCTGGACGATTCCTGATTGTCGTGTCATAGATTGGACCGACATTAGAGATATAGTAACGGCAGTATGTTATCGACCCGATGGCCAGGGAGGGATTATTGGGTCCATGGCAGGAAATTGTCGATTTTATAATGTATCAGATAATCAGTTGCAGTTGGATTCCCAACTATGTTTACTTGCTAAAAAGAAATTTACTGGAAGAGGGATAACAGGCTTTCAGTTTTTTCCACAAGATTGTAACAAAGTTATGGTTACCTGTGCGGATTCACAAGTCAGAATCCTTGACGGGCTTAATGTGATTGGCAAATACAAGAGCGTAGGCACAGGGAGCCCAATGAGTGCATCTTTCACTTCTGATGGCAAACATATATTATCAGCATCCGAGGATTCTAATGTATATATGTGGAATGTTAGTCAGGAGGAGTCTATTCCCATGAAAGCTAAGAAGATTTGGTCTTCTGAGCGGTTTTTCTCAAACGCTTCCATTGCAGTGCCTTGGCAAGGTTTGAAACCTCAGACCATGGAAAATGAACACCAATGGAATGTCCTAGATAAAACTTCACCCGAATCTGTACATCTTAACCCACCTGCTTCATTCTCCCTGGGTCAAGAGTATTTCTTGGAGGCTTTGCCTAAGGGATCTGCAACTTGGCCAGAGGAGAAGCTTCCAATTTCTAGCTCCAAGGCAAAAACGTCTACAATGCTTAAATCCGAGTACAGGTTCTTGAAATCTTCATGCAGGAGTACCTCTCGTTCTCATGCATGGGGGATGGTCATTGTGACTGCAGGCTGGGACGGTCGGATAAAGACATTCCACAATTACGGATTACCCGTACCCGTTTGA 2121 0.429 MGSFSEFEECRFFDAQEDVVSIADSVSDGTDTLDIKSTSNGRIGLEGFDYDVWIRSPRSVRERRGKFMKKMGLSVNGIENSVDVVGVVEQEEVRDRVEYSSGAVTRTCDGFEEEFCSSRSSMSCFSSIDSSKEYGLEENLLCQDKNSDKRVECNVDPKGEQRNMRDGRDVVLDRLANTGEPDDSEKPSGVTPSWQTNGNKRSWLRRLRSFTCMLDNQGDNGFGSGCKLQRVKVRQCKKQMKELSALYMRQDIKAHEGSITTMKFSPDGQYLASGSEDGVVRLWQVIEEDMSNEIDISEIDPSSLYFTVNNLSELKPLFMDKEKINKLKSMRKTQDSACIIFPPKIFRLLEKPLHEFYGHRGEVLDLSWSKNNYLLSSSVDKTVRLWQVKSDNCLKVFPHSNYVTCVQFNPVDDNYFISGSIDGKVRIWTIPDCRVIDWTDIRDIVTAVCYRPDGQGGIIGSMAGNCRFYNVSDNQLQLDSQLCLLAKKKFTGRGITGFQFFPQDCNKVMVTCADSQVRILDGLNVIGKYKSVGTGSPMSASFTSDGKHILSASEDSNVYMWNVSQEESIPMKAKKIWSSERFFSNASIAVPWQGLKPQTMENEHQWNVLDKTSPESVHLNPPASFSLGQEYFLEALPKGSATWPEEKLPISSSKAKTSTMLKSEYRFLKSSCRSTSRSHAWGMVIVTAGWDGRIKTFHNYGLPVPV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00497 706 SMART WD40_4 390 429 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 658 698 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 481 521 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 349 387 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 522 562 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 245 284 IPR001680 GO:0005515
Arst8g00497 706 SMART WD40_4 431 470 IPR001680 GO:0005515
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 539 571 IPR001680 GO:0005515
Arst8g00497 706 PANTHER WD REPEAT DOMAIN 44 8 703 IPR040324 -
Arst8g00497 706 SUPERFAMILY WD40 repeat-like 247 696 IPR036322 GO:0005515
Arst8g00497 706 PRINTS G protein beta WD-40 repeat signature 416 430 IPR020472 -
Arst8g00497 706 PRINTS G protein beta WD-40 repeat signature 374 388 IPR020472 -
Arst8g00497 706 PRINTS G protein beta WD-40 repeat signature 271 285 IPR020472 -
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 396 430 - -
Arst8g00497 706 ProSitePatterns Trp-Asp (WD) repeats signature. 549 563 IPR019775 -
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 396 430 IPR001680 GO:0005515
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 293 IPR001680 GO:0005515
Arst8g00497 706 Gene3D - 235 580 IPR015943 GO:0005515
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 356 390 - -
Arst8g00497 706 Pfam WD domain, G-beta repeat 252 283 IPR001680 GO:0005515
Arst8g00497 706 Pfam WD domain, G-beta repeat 351 386 IPR001680 GO:0005515
Arst8g00497 706 Pfam WD domain, G-beta repeat 392 428 IPR001680 GO:0005515
Arst8g00497 706 MobiDBLite consensus disorder prediction 177 197 - -
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 252 285 - -
Arst8g00497 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 356 396 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00497 Arst-Chr8 7156291 7160979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00497 348 559 U-box Gene Family AT2G33340 25.991 3.30e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00497 - - gmx:100817209 988.793