Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00476 ATGGGAGGTTCATCAGATACGAAGTTCCTGCAAGACTTGCTATTGTACGCGGCCAGCGCTGCTATGAGTTGCCTGGTTCTCTTCGTTGGATTACGACAACTTGACCCAACCCGGGAGGCTTCCAAAAAGGTCCTCGAACACAAGAAAGAGATTGCCAAGCGTCTTGGTCGACCCCTTGTCCAGACCAACCCTTACGAGGATGTTATAGCAGGTGACGTTATAAATCCTGATCACATCGATGTGGAGTTTGACTCTATTGGGGGATTGGAAACAATCAAGCAAGCTCTGTTTGAGCTTGTTATACTGCCTCTGAAAAGACCGGACTTGTTTTCTTATGGTAAGCTTCTTGGACCTCAAAAGGGCGTCCTGTTGTATGGTCCTCCAGGAACTGGGAAAACCATGCTTGCGAAAGCAATTGCTAAGGAGTCAGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAAAAGCTTGTGACTGCTGTATTTACCCTTGCTAATAAGCTCCAGCCTGCCATCATATTCATTGATGAGGTTGACAGTTTTTTGGGTCAACGTCGTACATCGGATCATGAGGCTTTATTAAACATGAAAACTGAGTTTATGGCTCTATGGGATGGATTTACCACAGATCATAATGCTCGAGTTATGGTCCTTGCAGCTACCAATCGTCCTTCTGAACTTGATGAAGCAATACTTCGACGCCTTCCTCAAGCTTTTGAAATTGGAATTCCAGACCAGAGGGAGAGAGCTGCAATATTGAAGGTTATCTTAAGGGGAGAGAGGGTTGACGAAGGCATAGACTTTGATTATATAGCTAGCTTATGTGACGGTTATACTGGGTCAGATCTGTTTGACCTTTGCAAGAAGGCTGCCTATCTTCCTATTCGAGAACTACTAGATGAAGAGAAGAAGGGAAAACGTTCTTCCGTGCCTAGGCCTTTGTCGCAGTTGGATTTGGAGAAGGTCCTTGACACTTCCCAGAAGACGAAGGCTGCTGCAAGTGCATACAGTGGGTTGTCATCATCAAGATGGACACCAAGTGAGTCAGGTGATTATCAACTTCAAGCTGCAATCAATGAAATTTCTAAGCTTGTGGTTTCTCACATGATTAACCTCCATGCTCAGGATCCGTAA 1161 0.4496 MGGSSDTKFLQDLLLYAASAAMSCLVLFVGLRQLDPTREASKKVLEHKKEIAKRLGRPLVQTNPYEDVIAGDVINPDHIDVEFDSIGGLETIKQALFELVILPLKRPDLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAVFTLANKLQPAIIFIDEVDSFLGQRRTSDHEALLNMKTEFMALWDGFTTDHNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERAAILKVILRGERVDEGIDFDYIASLCDGYTGSDLFDLCKKAAYLPIRELLDEEKKGKRSSVPRPLSQLDLEKVLDTSQKTKAAASAYSGLSSSRWTPSESGDYQLQAAINEISKLVVSHMINLHAQDP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00476 386 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Arst8g00476 386 CDD RecA-like_ATAD1 85 250 - -
Arst8g00476 386 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Arst8g00476 386 Pfam AAA+ lid domain 275 310 IPR041569 -
Arst8g00476 386 Gene3D - 253 333 - -
Arst8g00476 386 SMART AAA_5 118 254 IPR003593 GO:0016887
Arst8g00476 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Arst8g00476 386 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Arst8g00476 386 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 343 - -
Arst8g00476 386 Gene3D - 80 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00476 Arst-Chr8 6686454 6690671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00476 81 355 Calmodulin-binding Proteins AT3G56690 31.633 3.82e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00476 K22530 - gmx:100796908 652.129