Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00444 ATGGACAACACCATTGACCAGTTGAAATCATCTTCCTCTTCGGAAGAGGATCAGATGGACTTGATGAACATGATGATGATGCAACTTCCTAACGAATTCTCTTCACCTAATTACGCTGATGAGACCAGCGTCCAAGGATTCCACCCATCACCACAGCTTCTTGGTGCACGCAGTAGCAGTACTATGCAACTATCAGATTCAATTGATAACAGAAATTCTATCATGCCCTGGTCTTCACCATCCACCACAATCTCTTTCTCTAACAACAACACTACCTCAATGCTTCAAACAGAATTGCCATCTTTGTTGGGAAATTCAGGTGCAACGGAGAATAAGCGGAACTCGATGGCGGCGATGAGGGAGATGATATTCAGAATAGCGGCCATGCAGCCAATACACATAGACCCTGAGTCAGTAAAGCCACCAAAGCGGAGGAACGTGAAGATCTCGAAGGATCCACAGAGTGTGGCGGCGCGGCACAGGAGAGAAAGGATAAGTGAGAGAATAAGGATACTGCAGAGACTGGTCCCCGGAGGAACCAAGATGGACACTGCTTCAATGCTTGATGAGGCCATTCACTACGTCAAATTTCTCAAGGCTCAGATTCACTCATTGGAACGTGCTTCTTCTTCTGCAAGCAATAATAATAATAATAATGCAACTGCATCAGGTGCAGGTGCAGCTACTGCCACTGCCAATGCCCCTGGCGCCTCTTATCTTTCTCTACCTAAACCTTATCAAGGTCGAAATGCTCACCATTATGGAGATGCATGA 774 0.4612 MDNTIDQLKSSSSSEEDQMDLMNMMMMQLPNEFSSPNYADETSVQGFHPSPQLLGARSSSTMQLSDSIDNRNSIMPWSSPSTTISFSNNNTTSMLQTELPSLLGNSGATENKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKAQIHSLERASSSASNNNNNNATASGAGAATATANAPGASYLSLPKPYQGRNAHHYGDA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00444 257 Gene3D - 148 222 IPR036638 GO:0046983
Arst8g00444 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 208 IPR036638 GO:0046983
Arst8g00444 257 FunFam BHLH transcription factor 152 217 - -
Arst8g00444 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Arst8g00444 257 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 16 235 IPR045843 GO:0003700|GO:0006355
Arst8g00444 257 SMART finulus 155 204 IPR011598 GO:0046983
Arst8g00444 257 Pfam Helix-loop-helix DNA-binding domain 158 198 IPR011598 GO:0046983
Arst8g00444 257 Coils Coil 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00444 Arst-Chr8 6434105 6434878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00444 75 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 65.359 2.12e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g00444 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00444 - - tpra:123913324 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g00444 8 6434105 6434878 Arst8g00444 8 6434105 6434878 ECH