Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g00408 ATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCACTCGCAAGGCGTCATCCACAGAGATCTCAAGTCAAATAACCTTCTTCTCAATGATGAGATGAGGGTTAAGGTGGCAGATTTCGGCACATCTTGTCTCGAAACAAGGTGCCGGGAGACCAAAGGAAACATGGGAACGTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTACTTCCCTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCACTGCCGGCAAGTTGCCAGCCAGCACTAGCACACCTCATAAAGCGTTGCTGGGCGGCGAACCCATCGAAGAGGCCGGACTTCAGTGACATAGTGACCACTCTTGAGAAGTACGATGAATGTGTGAAGGAGGGACTTCCCCTAACTCATCATTCAAGACTTGTCAGCAGAAACCTCATTGAACGCTTAAAAGGCTGCGTCTCCATGAGTTCCTCCATACCTGTACATGCTTAA 651 0.47 MSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVTTLEKYDECVKEGLPLTHHSRLVSRNLIERLKGCVSMSSSIPVHA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g00408 216 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00408 216 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 177 - -
Arst8g00408 216 SMART serkin_6 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g00408 216 Gene3D Transferase(Phosphotransferase) domain 1 2 202 - -
Arst8g00408 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Arst8g00408 216 CDD STKc_MAP3K-like 1 174 - -
Arst8g00408 216 Pfam Protein tyrosine and serine/threonine kinase 1 174 IPR001245 GO:0004672|GO:0006468
Arst8g00408 216 PRINTS Tyrosine kinase catalytic domain signature 82 92 IPR001245 GO:0004672|GO:0006468
Arst8g00408 216 PRINTS Tyrosine kinase catalytic domain signature 145 167 IPR001245 GO:0004672|GO:0006468
Arst8g00408 216 PRINTS Tyrosine kinase catalytic domain signature 36 54 IPR001245 GO:0004672|GO:0006468
Arst8g00408 216 PRINTS Tyrosine kinase catalytic domain signature 101 123 IPR001245 GO:0004672|GO:0006468
Arst8g00408 216 FunFam serine/threonine-protein kinase HT1 3 196 - -
Arst8g00408 216 SUPERFAMILY Protein kinase-like (PK-like) 1 174 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g00408 Arst-Chr8 5908413 5910741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g00408 1 216 MAP Kinase Kinase Kinase AT1G62400 85.714 2.45e-140 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst8g00408 PK_Tyr_Ser-Thr 8.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g00408 - - adu:107460343 440.654